ID I3MMI7_ICTTR Unreviewed; 774 AA.
AC I3MMI7;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 2.
DT 08-NOV-2023, entry version 59.
DE SubName: Full=SRY-box transcription factor 30 {ECO:0000313|Ensembl:ENSSTOP00000012751.3};
GN Name=SOX30 {ECO:0000313|Ensembl:ENSSTOP00000012751.3};
OS Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus
OS tridecemlineatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae;
OC Xerinae; Marmotini; Ictidomys.
OX NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000012751.3, ECO:0000313|Proteomes:UP000005215};
RN [1] {ECO:0000313|Proteomes:UP000005215}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG The Broad Institute Genome Assembly & Analysis Group;
RG Computational R&D Group;
RG and Sequencing Platform;
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lindblad-Toh K.;
RT "The Draft Genome of Spermophilus tridecemlineatus.";
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSSTOP00000012751.3}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR EMBL; AGTP01039004; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGTP01039005; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGTP01039006; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGTP01039007; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGTP01039008; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGTP01039009; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; I3MMI7; -.
DR STRING; 43179.ENSSTOP00000012751; -.
DR Ensembl; ENSSTOT00000014235.3; ENSSTOP00000012751.3; ENSSTOG00000014216.3.
DR eggNOG; KOG0527; Eukaryota.
DR GeneTree; ENSGT00940000161042; -.
DR HOGENOM; CLU_021249_0_0_1; -.
DR InParanoid; I3MMI7; -.
DR TreeFam; TF336594; -.
DR Proteomes; UP000005215; Unassembled WGS sequence.
DR GO; GO:0010369; C:chromocenter; IEA:Ensembl.
DR GO; GO:0005829; C:cytosol; IEA:Ensembl.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0008013; F:beta-catenin binding; IEA:Ensembl.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IEA:Ensembl.
DR GO; GO:0001227; F:DNA-binding transcription repressor activity, RNA polymerase II-specific; IEA:Ensembl.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IEA:Ensembl.
DR GO; GO:0030178; P:negative regulation of Wnt signaling pathway; IEA:Ensembl.
DR GO; GO:0120211; P:proacrosomal vesicle fusion; IEA:Ensembl.
DR GO; GO:0031960; P:response to corticosteroid; IEA:Ensembl.
DR CDD; cd22033; HMG-box_SoxH_SOX30; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR47279; TRANSCRIPTION FACTOR SOX-30; 1.
DR PANTHER; PTHR47279:SF1; TRANSCRIPTION FACTOR SOX-30; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Reference proteome {ECO:0000313|Proteomes:UP000005215}.
FT DOMAIN 358..426
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 358..426
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..43
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 158..207
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 523..577
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 747..774
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 13..37
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 535..577
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 774 AA; 84472 MW; B0399E111FBEFB91 CRC64;
STISRPSKPP GDRPHTPRNP LLRISPSPRP APSANPPKTL PQGEKYSCQA QWCTLVISAT
GEAEAGGLQS QLGSQELSET LCQKKKKKVK PEQVLLLPPG PLLPQAQDEG AAVSPAQARL
LQLRSELLLL PPPPASEGAP CRPELRPVQP RALQVKAEKQ ELGPALDPST GPRRAVEAGP
RACRAAKVEG PGPALDSRRG DEKKGKLEAE EVMRDAAKGR EGKSLTAVGE GVIKTEEPER
LSEDCRLGAE PASNGLGHGS KEVILAQPSS AFGPHQQDLR IPLTLHTVPP GARIQFQGPP
PSELIRLTKV PLTPVPIKMQ SLLEPSVKIE TKDVPLTVLP SDAGIPDTPF SKDRNGHVKR
PMNAFMVWAR IHRPALAKAN PAANNAEISV QLGLEWNKLS EEQKKPYYDE AQKIKEKHRE
EFPGWVYQPR PGKRKRFPLS VSNVFSGTTQ NIISTNPTTI YPYRSPTYSV VIPSLQNTIT
HPVGEAPPAI QLPTPAVQRP SPITLFQPSV SSTAQVAVQA PSLPLRPALP PQRFAGPSQT
DTHRLPSGAN RSVKRPTPVS LESTSRIPTS ASTAHARFAT STIQPPKEYS SVSTCPRSAP
IPQAPPLPHS HVYQPPPLGH PATLFGTPPR FSFHHPYFLP GPHYFPSSTC PYSRPPFGYG
NFPSSMPECL GYYEDRYQKH EAMFSALNRD YPFRDYPDER THNEDSRGCE SLDGTSYYNS
HSHSGEEYLN PMPQLDIGAL ENVFTAPTST PSSIQQVNVT DSDEEEEEKV LRNL
//