ID I3MWW0_ICTTR Unreviewed; 1087 AA.
AC I3MWW0;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 2.
DT 27-MAR-2024, entry version 63.
DE SubName: Full=Transcription elongation regulator 1 {ECO:0000313|Ensembl:ENSSTOP00000016605.2};
GN Name=TCERG1 {ECO:0000313|Ensembl:ENSSTOP00000016605.2};
OS Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus
OS tridecemlineatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae;
OC Xerinae; Marmotini; Ictidomys.
OX NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000016605.2, ECO:0000313|Proteomes:UP000005215};
RN [1] {ECO:0000313|Proteomes:UP000005215}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG The Broad Institute Genome Assembly & Analysis Group;
RG Computational R&D Group;
RG and Sequencing Platform;
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lindblad-Toh K.;
RT "The Draft Genome of Spermophilus tridecemlineatus.";
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSSTOP00000016605.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; AGTP01032977; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGTP01032978; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; I3MWW0; -.
DR STRING; 43179.ENSSTOP00000016605; -.
DR Ensembl; ENSSTOT00000029917.2; ENSSTOP00000016605.2; ENSSTOG00000024158.2.
DR GeneTree; ENSGT00940000157770; -.
DR HOGENOM; CLU_793549_0_0_1; -.
DR InParanoid; I3MWW0; -.
DR OrthoDB; 2882240at2759; -.
DR Proteomes; UP000005215; Unassembled WGS sequence.
DR GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
DR GO; GO:0070064; F:proline-rich region binding; IEA:Ensembl.
DR GO; GO:0070063; F:RNA polymerase binding; IEA:InterPro.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR CDD; cd00201; WW; 3.
DR Gene3D; 2.20.70.10; -; 3.
DR Gene3D; 1.10.10.440; FF domain; 6.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR045148; TCRG1-like.
DR InterPro; IPR001202; WW_dom.
DR InterPro; IPR036020; WW_dom_sf.
DR PANTHER; PTHR15377; TRANSCRIPTION ELONGATION REGULATOR 1; 1.
DR PANTHER; PTHR15377:SF7; TRANSCRIPTION ELONGATION REGULATOR 1; 1.
DR Pfam; PF01846; FF; 6.
DR Pfam; PF00397; WW; 2.
DR SMART; SM00441; FF; 6.
DR SMART; SM00456; WW; 3.
DR SUPFAM; SSF81698; FF domain; 5.
DR SUPFAM; SSF51045; WW domain; 3.
DR PROSITE; PS51676; FF; 6.
DR PROSITE; PS01159; WW_DOMAIN_1; 1.
DR PROSITE; PS50020; WW_DOMAIN_2; 3.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000005215}.
FT DOMAIN 131..164
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 401..434
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 504..533
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 648..701
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 714..768
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 780..835
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 885..941
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 943..999
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 1001..1066
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT REGION 1..85
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 231..318
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 441..498
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 859..884
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1065..1087
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 700..727
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 36..85
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 231..299
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 300..318
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 441..456
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 468..492
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1087 AA; 123178 MW; AEE976CE460FD0A3 CRC64;
MAERGGDGGD GERFNPGELR MAQQQALRFR GPAPPPNAVM RGPPPLMRPP PPFGMMRGPP
PPPRPPFGRP PFDPNMPPMP PPGGIPPPMG PPHLQRPPFM PPPMGTMPPP PGMMFPPGMP
PVTAPGTPAL PPTEEIWVEN KTPDGKVYYY NARTRESAWT KPDGVKVIQQ SELTPMLAAQ
AQVQAQAQAQ AQAQAQAQAQ AQAQAQAQAQ AQAQAQAQVQ AQVQAQAVGA STPTTSSPAP
AVSTSTSSST PSSTTSTTTT ATSVVQTVST PTTQDQTPSS AVSVATPTVS VSTPAPTATP
VQTVPQPHPQ TLPPAVPHSV PQPAAAIPAF PPVMVPPFRV PLPGMPIPLP GVAMMQIVSC
PYVKTVATTK TGVLPGMAPP IVPMIHPQVA IAASPATLAG ATAVSEWTEY KTADGKTYYY
NNRTLESTWE KPQELKEKEK LEEKIKEPIK EPSEEPLPME TEEEDPKEEP MKEIKEEPKE
EEMTEEEKAA QKAKPVATTP IPGTPWCVVW TGDERVFFYN PTTRLSMWDR PDDLIGRADV
DKIIQEPPHK KGLEDMKKLR HPTPTMLSIQ KWQFSMSAIK EEQELMEEIN EDEPVKAKKR
KRMSKKSFMW IARASLFRRD DNKDIDSEKE AAMEAEIKAA RERAIVPLEA RMKQFKDMLL
ERGVSAFSTW EKELHKIVFD PRYLLLNPKE RKQVFDQYVK TRAEEERREK KNKIMQAKED
FKKMMEEAKF NPRVTFSEFA AKHAKDSRFK AIEKMKDREA LFNEFVAAAR KKEKEDSKTR
GEKIKSDFFE LLSNYHLDSQ SRWSKVKDKV ESDPRYKAVD SSSMREDLFK QYIEKIAKNL
DSEKEKELER QARIEASLRE REREVQKARS EQTKEIDRER EQHKREEAIQ NFKALLSDMV
RSSDVSWSDT RRTLRKDHRW ESGSLLEREE KEKLFNEHIE ALTKKKREHF RQLLDETSAI
TLTSTWKEVK KIIKEDPRCI KFSSSDRKKQ REFEEYIRDK YITAKADFRT LLKETKFITY
RSKKLIQESD QHLKDVEKIL QNDKRYLVLD CVPEERRKLI VAYVDDLDRR GPPPPPTASE
PTRRSTK
//
