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Database: UniProt
Entry: I3NA20_ICTTR
LinkDB: I3NA20_ICTTR
Original site: I3NA20_ICTTR 
ID   I3NA20_ICTTR            Unreviewed;       364 AA.
AC   I3NA20;
DT   11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT   22-NOV-2017, sequence version 2.
DT   24-JAN-2024, entry version 61.
DE   SubName: Full=LIM and cysteine rich domains 1 {ECO:0000313|Ensembl:ENSSTOP00000021217.2};
GN   Name=LMCD1 {ECO:0000313|Ensembl:ENSSTOP00000021217.2};
OS   Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus
OS   tridecemlineatus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae;
OC   Xerinae; Marmotini; Ictidomys.
OX   NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000021217.2, ECO:0000313|Proteomes:UP000005215};
RN   [1] {ECO:0000313|Proteomes:UP000005215}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG   The Broad Institute Genome Assembly & Analysis Group;
RG   Computational R&D Group;
RG   and Sequencing Platform;
RA   Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA   MacCallum I., Young S., Walker B.J., Lindblad-Toh K.;
RT   "The Draft Genome of Spermophilus tridecemlineatus.";
RL   Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Ensembl:ENSSTOP00000021217.2}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   EMBL; AGTP01073420; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; AGTP01073421; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   RefSeq; XP_005333902.1; XM_005333845.2.
DR   AlphaFoldDB; I3NA20; -.
DR   STRING; 43179.ENSSTOP00000021217; -.
DR   Ensembl; ENSSTOT00000021182.2; ENSSTOP00000021217.2; ENSSTOG00000013558.3.
DR   GeneID; 101966544; -.
DR   CTD; 29995; -.
DR   eggNOG; KOG1704; Eukaryota.
DR   GeneTree; ENSGT00940000158813; -.
DR   HOGENOM; CLU_008937_1_0_1; -.
DR   InParanoid; I3NA20; -.
DR   OrthoDB; 370973at2759; -.
DR   Proteomes; UP000005215; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:Ensembl.
DR   GO; GO:0003714; F:transcription corepressor activity; IEA:Ensembl.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IEA:Ensembl.
DR   GO; GO:0070886; P:positive regulation of calcineurin-NFAT signaling cascade; IEA:Ensembl.
DR   GO; GO:0010611; P:regulation of cardiac muscle hypertrophy; IEA:Ensembl.
DR   CDD; cd09340; LIM1_Testin_like; 1.
DR   CDD; cd09829; PET_testin; 1.
DR   Gene3D; 2.10.110.10; Cysteine Rich Protein; 2.
DR   InterPro; IPR010442; PET_domain.
DR   InterPro; IPR033724; PET_testin.
DR   InterPro; IPR047120; Pk/Esn/Tes.
DR   InterPro; IPR001781; Znf_LIM.
DR   PANTHER; PTHR24211:SF0; LIM AND CYSTEINE-RICH DOMAINS PROTEIN 1; 1.
DR   PANTHER; PTHR24211; LIM DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF00412; LIM; 2.
DR   Pfam; PF06297; PET; 1.
DR   SMART; SM00132; LIM; 2.
DR   SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR   PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR   PROSITE; PS50023; LIM_DOMAIN_2; 2.
DR   PROSITE; PS51303; PET; 1.
PE   4: Predicted;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW   ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005215};
KW   Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT   DOMAIN          99..206
FT                   /note="PET"
FT                   /evidence="ECO:0000259|PROSITE:PS51303"
FT   DOMAIN          240..305
FT                   /note="LIM zinc-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50023"
FT   DOMAIN          306..364
FT                   /note="LIM zinc-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS50023"
FT   REGION          200..234
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   364 AA;  41070 MW;  6BE6753635BA9B4B CRC64;
     MAKVAKNLSP RLQKMSLGQQ QAARSVTCLR CKGMCSGFEP HSWRKICKSC KCSQEDHCLS
     SDLEDDRKIG RLLMDSKYSS LTARVKGGDG IRIYKRNRMI MTNPIATGKD PTFDTITYEW
     APPGVTQKLG LQYMELIPKE KQPVTGTEGA YYRRRQLMHQ LPIYDQDPSR CRGLLENELK
     VMEEFVKQYK SEALGVGEVA LPGQGGLPKE EGKQQEKPEG TEAAPTTNGS LGDPSKEVEY
     FCELCKEAAP ADSPVVYSER AGYSKQWHPA CFVCVKCSEP LVDLIYFWKD GAPWCGRHYC
     ESLRPRCSGC DEIIFSEDYQ RVEDLAWHRK HFVCEGCEQL LSGRAYIVTK GQLLCPTCSK
     SKRS
//
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