UniProt: I3RAM0

Database: UniProt
Entry: I3RAM0_HALMT

LinkDB:  I3RAM0_HALMT 
Original site:  I3RAM0_HALMT

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Ontology (2)   
   GO (2)   
Gene (2)   
   KEGG GENES (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   EMBL (4)   
Protein domain (3)   
   InterPro (2)   
   Pfam (1)   
Literature (3)   
   PubMed (3)   
All databases (15)   

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ID   I3RAM0_HALMT            Unreviewed;       638 AA.
AC   I3RAM0;
DT   05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT   05-SEP-2012, sequence version 1.
DT   27-MAR-2024, entry version 59.
DE   SubName: Full=Chromosome segregation protein SMC {ECO:0000313|EMBL:AHZ24622.1};
GN   OrderedLocusNames=HFX_6156 {ECO:0000313|EMBL:AFK21280.1};
GN   ORFNames=BM92_17145 {ECO:0000313|EMBL:AHZ24622.1}, C439_18738
GN   {ECO:0000313|EMBL:ELZ97388.1}, E6P09_17060
GN   {ECO:0000313|EMBL:QCQ77018.1};
OS   Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC
OS   14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei).
OG   Plasmid HMPLAS1 {ECO:0000313|EMBL:AHZ24622.1,
OG   ECO:0000313|Proteomes:UP000027075},
OG   Plasmid pHM500 {ECO:0000313|EMBL:AFK21280.1,
OG   ECO:0000313|Proteomes:UP000006469}, and
OG   Plasmid pHME505 {ECO:0000313|EMBL:QCQ77018.1,
OG   ECO:0000313|Proteomes:UP000299011}.
OC   Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales;
OC   Haloferacaceae; Haloferax.
OX   NCBI_TaxID=523841 {ECO:0000313|EMBL:AFK21280.1, ECO:0000313|Proteomes:UP000006469};
RN   [1] {ECO:0000313|EMBL:AFK21280.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CGMCC 1.2087 {ECO:0000313|EMBL:AFK21280.1};
RX   PubMed=22247127; DOI=10.1128/AEM.07114-11;
RA   Cai S., Cai L., Liu H., Liu X., Han J., Zhou J., Xiang H.;
RT   "Identification of the haloarchaeal phasin (PhaP) that functions in
RT   polyhydroxyalkanoate accumulation and granule formation in Haloferax
RT   mediterranei.";
RL   Appl. Environ. Microbiol. 78:1946-1952(2012).
RN   [2] {ECO:0000313|EMBL:AFK21280.1, ECO:0000313|Proteomes:UP000006469}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 /
RC   R-4 {ECO:0000313|Proteomes:UP000006469}, and CGMCC 1.2087
RC   {ECO:0000313|EMBL:AFK21280.1};
RC   PLASMID=pHM500 {ECO:0000313|Proteomes:UP000006469};
RX   PubMed=22843593; DOI=10.1128/JB.00880-12;
RA   Han J., Zhang F., Hou J., Liu X., Li M., Liu H., Cai L., Zhang B., Chen Y.,
RA   Zhou J., Hu S., Xiang H.;
RT   "Complete genome sequence of the metabolically versatile halophilic
RT   archaeon Haloferax mediterranei, a poly(3-hydroxybutyrate-co-3-
RT   hydroxyvalerate) producer.";
RL   J. Bacteriol. 194:4463-4464(2012).
RN   [3] {ECO:0000313|Proteomes:UP000011603}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 /
RC   R-4 {ECO:0000313|Proteomes:UP000011603};
RA   Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A.,
RA   Eisen J.A., Facciotti M.T.;
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:ELZ97388.1, ECO:0000313|Proteomes:UP000011603}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 {ECO:0000313|EMBL:ELZ97388.1}, and ATCC 33500 / DSM
RC   1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4
RC   {ECO:0000313|Proteomes:UP000011603};
RX   PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA   Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA   Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT   "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT   strategies for static and dynamic osmo-response.";
RL   PLoS Genet. 10:E1004784-E1004784(2014).
RN   [5] {ECO:0000313|EMBL:AHZ24622.1, ECO:0000313|Proteomes:UP000027075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 {ECO:0000313|EMBL:AHZ24622.1}, and ATCC 33500 / DSM
RC   1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4
RC   {ECO:0000313|Proteomes:UP000027075};
RC   PLASMID=HMPLAS1 {ECO:0000313|EMBL:AHZ24622.1}, and Plasmid HMPLAS1
RC   {ECO:0000313|Proteomes:UP000027075};
RA   Bautista V.;
RT   "Transcriptional profiles of Haloferax mediterranei on the basis of
RT   nitrogen availability.";
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:AFK21280.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CGMCC 1.2087 {ECO:0000313|EMBL:AFK21280.1};
RC   PLASMID=pHM500 {ECO:0000313|EMBL:AFK21280.1};
RA   Wang L., Yang H., Xiang H.;
RL   Submitted (MAY-2014) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:QCQ77018.1, ECO:0000313|Proteomes:UP000299011}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 {ECO:0000313|EMBL:QCQ77018.1}, and ATCC 33500 / DSM
RC   1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4
RC   {ECO:0000313|Proteomes:UP000299011};
RC   PLASMID=pHME505 {ECO:0000313|EMBL:QCQ77018.1,
RC   ECO:0000313|Proteomes:UP000299011};
RA   DasSarma S., DasSarma P., DasSarma S., Fomenkov A., Vincze T., Anton B.P.,
RA   Roberts R.J.;
RT   "Methylomes of two halophilic Archaea, Haloarcula marismortui and Haloferax
RT   mediterranei.";
RL   Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP001871; AFK21280.1; -; Genomic_DNA.
DR   EMBL; CP007554; AHZ24622.1; -; Genomic_DNA.
DR   EMBL; AOLO01000015; ELZ97388.1; -; Genomic_DNA.
DR   EMBL; CP039140; QCQ77018.1; -; Genomic_DNA.
DR   RefSeq; WP_004060966.1; NZ_CP039140.1.
DR   AlphaFoldDB; I3RAM0; -.
DR   GeneID; 40158163; -.
DR   KEGG; hme:HFX_6156; -.
DR   PATRIC; fig|523841.21.peg.3760; -.
DR   HOGENOM; CLU_409187_0_0_2; -.
DR   OrthoDB; 241568at2157; -.
DR   Proteomes; UP000006469; Plasmid pHM500.
DR   Proteomes; UP000011603; Unassembled WGS sequence.
DR   Proteomes; UP000027075; Plasmid HMPLAS1.
DR   Proteomes; UP000299011; Plasmid pHME505.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0006302; P:double-strand break repair; IEA:InterPro.
DR   Gene3D; 1.10.287.510; Helix hairpin bin; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR038729; Rad50/SbcC_AAA.
DR   Pfam; PF13476; AAA_23; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW   Plasmid {ECO:0000313|EMBL:AFK21280.1}.
FT   DOMAIN          14..245
FT                   /note="Rad50/SbcC-type AAA"
FT                   /evidence="ECO:0000259|Pfam:PF13476"
FT   REGION          246..269
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          346..501
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   638 AA;  72806 MW;  22F1B1BD4E882DB8 CRC64;
     MTVTSRATGV TVEARNIGGI EDTSVEFEPG ITILVGRNAT NRTSFLQALM AALGSDTASL
     KADADEGEVS LTFGDETYTR VLKRQGSNVV TSGNPYLSDP ELADLFAFLL ESNEARRAVE
     RGDDLRELIM RPVDTTAIEA KITQLEAERR KIDSKLRESD NIDQTIANLE QREAELDNKI
     EQAHERLEEL EAEIETAERS DDGDDELLDQ LNELRSTLEN VRFRLETERQ SLEALRDDEA
     DIREALDELP DETTDSPEEL ESRLESRRER VRELESQMNE IQNIVRANES MLSGSNTGVA
     SALRDDENGN VTDQLLGDDQ IVCWTCGSEV SQETIEATVE HLQDYRATLA AERRSAREEI
     DELSSRVDSI EERRNRRREL SSRLEQTIAE RKETADRIED LESRQEELRE EVAAVEEEAE
     DVDDETDELV ELHSKANRAE LECDRLESER QRVRDRLNEA QTRKEELAEF EARRAEIDDE
     IRELRGRIDR IEAEAVDAFN DHMERVLDIL QYENIERVWI ERIHQEQTGR GASRDNREFN
     LHIVRQTESG SVYEDTVDHL SESEREVIGL VFGLAGYLVH DVAEQLPFML LDSLEAIDSE
     RIASLVEYVH EHAEYVVVAL LPEDASALDD AHERITEI
//

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