GenomeNet

Database: UniProt
Entry: I3TWX9_TISMK
LinkDB: I3TWX9_TISMK
Original site: I3TWX9_TISMK 
ID   I3TWX9_TISMK            Unreviewed;       288 AA.
AC   I3TWX9;
DT   05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT   05-SEP-2012, sequence version 1.
DT   27-MAR-2024, entry version 50.
DE   SubName: Full=IclR family transcriptional regulator {ECO:0000313|EMBL:AFK57267.1};
GN   Name=iclR {ECO:0000313|EMBL:AFK57267.1};
GN   OrderedLocusNames=TMO_c0657 {ECO:0000313|EMBL:AFK57267.1};
OS   Tistrella mobilis (strain KA081020-065).
OG   Plasmid pTM3 {ECO:0000313|EMBL:AFK57267.1,
OG   ECO:0000313|Proteomes:UP000005258}.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Geminicoccales;
OC   Geminicoccaceae; Tistrella.
OX   NCBI_TaxID=1110502 {ECO:0000313|EMBL:AFK57267.1, ECO:0000313|Proteomes:UP000005258};
RN   [1] {ECO:0000313|EMBL:AFK57267.1, ECO:0000313|Proteomes:UP000005258}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KA081020-065 {ECO:0000313|Proteomes:UP000005258};
RC   PLASMID=Plasmid pTM3 {ECO:0000313|Proteomes:UP000005258};
RX   PubMed=22458477; DOI=10.1021/ja301735a;
RA   Xu Y., Kersten R.D., Nam S.J., Lu L., Al-Suwailem A.M., Zheng H.,
RA   Fenical W., Dorrestein P.C., Moore B.S., Qian P.Y.;
RT   "Bacterial biosynthesis and maturation of the didemnin anti-cancer
RT   agents.";
RL   J. Am. Chem. Soc. 134:8625-8632(2012).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP003239; AFK57267.1; -; Genomic_DNA.
DR   AlphaFoldDB; I3TWX9; -.
DR   KEGG; tmo:TMO_c0657; -.
DR   HOGENOM; CLU_062618_2_0_5; -.
DR   Proteomes; UP000005258; Plasmid pTM3.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 3.30.450.40; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR   InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR   PANTHER; PTHR30136:SF8; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF09339; HTH_IclR; 1.
DR   Pfam; PF01614; IclR; 1.
DR   SMART; SM00346; HTH_ICLR; 1.
DR   SUPFAM; SSF55781; GAF domain-like; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS51077; HTH_ICLR; 1.
DR   PROSITE; PS51078; ICLR_ED; 1.
PE   4: Predicted;
KW   Plasmid {ECO:0000313|EMBL:AFK57267.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000005258};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          44..106
FT                   /note="HTH iclR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51077"
FT   DOMAIN          107..286
FT                   /note="IclR-ED"
FT                   /evidence="ECO:0000259|PROSITE:PS51078"
SQ   SEQUENCE   288 AA;  29573 MW;  10A71B99E7E4382F CRC64;
     MRSIAAAAIC RKAPKTMGGQ DPAMAAIELE EGGAIGAAAG SRGIQSVEIG NRVLMVLMRA
     GGPLPLKAIA QAAGISASNA HRYLASYVRD GLVVQDGDGG RYDLGPIALQ LGLAAMGRLD
     PVARAAAELP ALAEASGFTA HLAVWSLHGA VVVRLHRSRV PFVGALSLGS VMPLLRSATG
     RTFLAWLPES VTAPVLATET RAAGRDLPPV DVDALVAEIR ARRVATVDGS VVPGLAAASS
     PVLDWQNEAQ CVLTLIGTDR ALADPDHPAA LLLAERCRII SEDLGATA
//
DBGET integrated database retrieval system