ID I4N643_9PSED Unreviewed; 896 AA.
AC I4N643;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EIK96933.1};
GN ORFNames=PMM47T1_09746 {ECO:0000313|EMBL:EIK96933.1};
OS Pseudomonas sp. M47T1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1179778 {ECO:0000313|EMBL:EIK96933.1, ECO:0000313|Proteomes:UP000004339};
RN [1] {ECO:0000313|EMBL:EIK96933.1, ECO:0000313|Proteomes:UP000004339}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M47T1 {ECO:0000313|EMBL:EIK96933.1,
RC ECO:0000313|Proteomes:UP000004339};
RX PubMed=22887683; DOI=10.1128/JB.01116-12;
RA Proenca D.N., Espirito Santo C., Grass G., Morais P.V.;
RT "Draft Genome Sequence of Pseudomonas sp. Strain M47T1, Carried by
RT Bursaphelenchus xylophilus Isolated from Pinus pinaster.";
RL J. Bacteriol. 194:4789-4790(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIK96933.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AJWX01000006; EIK96933.1; -; Genomic_DNA.
DR RefSeq; WP_008368129.1; NZ_AJWX01000006.1.
DR AlphaFoldDB; I4N643; -.
DR STRING; 1179778.PMM47T1_09746; -.
DR PATRIC; fig|1179778.3.peg.1942; -.
DR eggNOG; COG2203; Bacteria.
DR eggNOG; COG5001; Bacteria.
DR OrthoDB; 9804951at2; -.
DR Proteomes; UP000004339; Unassembled WGS sequence.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 1.
DR SMART; SM00091; PAS; 2.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004339}.
FT DOMAIN 341..386
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 414..466
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 496..628
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 637..891
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 896 AA; 100501 MW; 1FABF478F7B71F6F CRC64;
MKSQPDAASR TAAEVVTQLP VPSRLGMLRF ERLNEANWAL LFLDPNCERQ FGLPAAELCA
LVGSPYASLM EPEARYQLHD AIQLQLANKP HYLVRYTLHT SSGPLALLEV GEPYKQHNRQ
LLRGYLLVVE TLAGEWPLGH GDLESQNTRL QVALELNQRA QQEQLQHLER VRAQQDLILR
LARQRYSTSD PLLEAGQLIT RSACEIYKID GARLWNLVDQ RLEPMAAYNA ITDEYEHPDV
IDLSGYPSYL EALHTSRAVD VNDTSCDPRT QEMAESLQAR DINAILDASI RIDGQVVGVL
CLEQTGETHP WQSDEIAFAG ELADQFAQVI SNHNRRTATS ALHLFQRAVE QSANAFLLVN
CEGVVEYVNP SFTAITQYST EEVHGQRLSQ LPALENLSEI LFDAPSSLAN SNSWQGEFKS
RRKNLEPYWG QLSISKVYGD NRELTHYIGI YEDITQSKLA QQRIERLAYT DNLTSLGNRP
AFIRNLDERF ARDSDSPISL LLVDIDNFKR INDSLGHQTG DKLLISLARR LRNSLSPTGS
LARFASNEFA VLLDDTDLES GYQTAVQVLK TLDKPMFVDN QLINVTGSVG LACAPLHGRD
PQTLMKNAGL ALHKAKANGK HQVQVFTEAL NAEASYKLFV ENNLRRALTQ NELEVFYQPK
LCLRTGRLLG MEALLRWNHP EKGMIRPDQF ISVAEETGLI IPIGKWIARQ ACRMTKSLIA
SGMGQLQVAI NLSPKQFSDP DLVASIAHIL KEEALDPALL ELELTEGLLL EATEDTHQQL
DQLKQLGLTL AMDDFGTGYS SLSYLKKFPI DIIKIDRSFI HEIPDNQDDM EITSAVIAMA
HNLKLKVVAE GIETAEQLSF LRRHRCDVGQ GYLFDRPIPS HELLRKLKRY PRGPGA
//
