ID I4VKB5_9GAMM Unreviewed; 967 AA.
AC I4VKB5;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=diguanylate cyclase {ECO:0000256|ARBA:ARBA00012528};
DE EC=2.7.7.65 {ECO:0000256|ARBA:ARBA00012528};
GN ORFNames=UU9_15050 {ECO:0000313|EMBL:EIL87656.1};
OS Rhodanobacter fulvus Jip2.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Rhodanobacteraceae; Rhodanobacter.
OX NCBI_TaxID=1163408 {ECO:0000313|EMBL:EIL87656.1, ECO:0000313|Proteomes:UP000004210};
RN [1] {ECO:0000313|EMBL:EIL87656.1, ECO:0000313|Proteomes:UP000004210}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Jip2T {ECO:0000313|Proteomes:UP000004210};
RX PubMed=22843592; DOI=10.1128/JB.00871-12;
RA Kostka J.E., Green S.J., Rishishwar L., Prakash O., Katz L.S.,
RA Marino-Ramirez L., Jordan I.K., Munk C., Ivanova N., Mikhailova N.,
RA Watson D.B., Brown S.D., Palumbo A.V., Brooks S.C.;
RT "Genome sequences for six rhodanobacter strains, isolated from soils and
RT the terrestrial subsurface, with variable denitrification capabilities.";
RL J. Bacteriol. 194:4461-4462(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIL87656.1}.
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DR EMBL; AJXU01000072; EIL87656.1; -; Genomic_DNA.
DR AlphaFoldDB; I4VKB5; -.
DR STRING; 1163408.UU9_15050; -.
DR PATRIC; fig|1163408.3.peg.3055; -.
DR eggNOG; COG3292; Bacteria.
DR eggNOG; COG3706; Bacteria.
DR Proteomes; UP000004210; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR011110; Reg_prop.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR011123; Y_Y_Y.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR45138:SF9; DIGUANYLATE CYCLASE DGCM-RELATED; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF07494; Reg_prop; 2.
DR Pfam; PF07495; Y_Y_Y; 1.
DR SMART; SM00267; GGDEF; 1.
DR SUPFAM; SSF63829; Calcium-dependent phosphotriesterase; 2.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50887; GGDEF; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000004210};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..17
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 18..967
FT /note="diguanylate cyclase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003695873"
FT TRANSMEM 742..763
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 833..966
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 967 AA; 106757 MW; AF135FDCFD275847 CRC64;
MLAMVALLLL ACAPLRAQQY SLQNYDRKAG LESLTITALL QDRRGFVWAG TEMGLYRFNG
GNFERMGVAQ GFDKGEYVTT VAQDPHRELL WVATQSGLRR GDGMHFTKVE PNGQPLVVDV
GRPLVMLDDG RVLLVRNDAL MVLSGDGQGQ DGQGQPWQLQ PMFDTAQLAA LPALRRITTA
YLAQGRLWLG CGTAVCSLDA SGHGQVVLHG PGQGVPADGW MGMLLDRAGN LWLRGTRHVS
VRLAGATRFT ARDLPESATG VVKDDGRFVE DRQGRVLTTT NHGLARWSGA GWVLIDSRNG
LPDININALM SDTQGSLWLG TYGRGIARWA GYGMVEGWGD VQGMQGLPNW SILRVDATHM
WFGNELGGSV LEDGKTRLQP WPVRVDPLPR QALSLAKAAD GGIWIGLYDH RLLRFDPASG
RTRLMARLPA FIKTLRVDRQ QRLWIATVNG IYYLDGEDAA VQRVAAAQTT DRQCSDIAEG
DDGTLWFACN TGVLRYAGGQ WSRMQTRGKA PVAGFSAVAV DADGSLWLGA NEPGVWRASV
QGEQLDIAPI VDAWLDNTLA YFIRRDQRGW IWVGGGGGVD IFDGRYWTHL SRDEGLLWDE
ANQNAFFEDT DGSVWIGSPV GVSHILHPQE MVARAPHTVA VTSVTHGDAP VEAGGEVSMD
GHAAPLTVRY AVLGGSPGSD LRFRYRLSGS DWVDTHSHVI NFTGLSSGNY RLEIQALDDD
HRTTSASTYV DFHIPRPWWE MWWVYLAEVL LLALLLAIIW RWYSRRLLRQ NRQLEALVSG
RTAELTEEKR ELERTRAELY QQATHDSLTG LHNRRAILEH LAARLESPVR HAAGLAVGLV
DVDHFKRIND TFGHQAGDAA LLTIAQRLQS QLRDGDRVGR YGGEELLVVL PNISRRAAIE
RMATIQSAVS AQPHRWGTQH FTVTLSIGMV WVGDEPASIE DVIRRADTAL YQAKHRGRDR
VSEFMSG
//
