ID I4VPP6_9GAMM Unreviewed; 827 AA.
AC I4VPP6;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE SubName: Full=Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EIL89187.1};
GN ORFNames=UU7_16977 {ECO:0000313|EMBL:EIL89187.1};
OS Rhodanobacter spathiphylli B39.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Rhodanobacteraceae; Rhodanobacter.
OX NCBI_TaxID=1163407 {ECO:0000313|EMBL:EIL89187.1, ECO:0000313|Proteomes:UP000003226};
RN [1] {ECO:0000313|EMBL:EIL89187.1, ECO:0000313|Proteomes:UP000003226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=B39 {ECO:0000313|EMBL:EIL89187.1,
RC ECO:0000313|Proteomes:UP000003226};
RX PubMed=22843592; DOI=10.1128/JB.00871-12;
RA Kostka J.E., Green S.J., Rishishwar L., Prakash O., Katz L.S.,
RA Marino-Ramirez L., Jordan I.K., Munk C., Ivanova N., Mikhailova N.,
RA Watson D.B., Brown S.D., Palumbo A.V., Brooks S.C.;
RT "Genome sequences for six rhodanobacter strains, isolated from soils and
RT the terrestrial subsurface, with variable denitrification capabilities.";
RL J. Bacteriol. 194:4461-4462(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIL89187.1}.
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DR EMBL; AJXT01000071; EIL89187.1; -; Genomic_DNA.
DR RefSeq; WP_007810552.1; NZ_AJXT01000071.1.
DR AlphaFoldDB; I4VPP6; -.
DR STRING; 1163407.UU7_16977; -.
DR PATRIC; fig|1163407.3.peg.3402; -.
DR eggNOG; COG3290; Bacteria.
DR eggNOG; COG5001; Bacteria.
DR OrthoDB; 9804951at2; -.
DR Proteomes; UP000003226; Unassembled WGS sequence.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 3.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 3.
DR PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08447; PAS_3; 1.
DR Pfam; PF08448; PAS_4; 2.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 3.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 3.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000003226}.
FT DOMAIN 88..139
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 140..210
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 214..266
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 267..340
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 429..562
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 571..824
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 827 AA; 91778 MW; E94809D510715348 CRC64;
MRPHKSAEVL PSLANRPDWS EKVLRGTPVL LAYLDHEQRF RYANETHRHW LGLDPARLIG
RHLVDVIGER NHRLAGTALA QAYAGTAASY EGELFNGNER RYAHGNFQPD FDPDGHVCGI
FTALIDITER RTLELQLHES EQRFFSAFQH AAIGMALTKP DGQFLRVNAA VCQMLGYSEQ
ELLQQDIGRL SHPEDVAADQ ALMAQLLAGE RDSYQLEKRN FHKLGHVVHI LLSVSLVRDA
AGTPLYFVSQ VQNISQRKAF EDALHREREL AEVTLRSIGD AVITTDPQVR VTSLNPIAEA
MTGWSSAEAN GRPIEEIFQL FDAQGGLAVA NPLRSAIEQN LIVDLAGKTL LRHRHGFDTP
VEDSSAPIHD HAGNVIGGVL VFHDVSENRA LALKMIHLTQ HDTLTGLPNR SQLPGHINRA
IDSASRRRQR AAVLYIDIDN FKQVNELVGH TAGDQVLRSF IGQLQRCLTG DELLSRYGGD
EFVVVLPHVD SAGEAAVLCR NLITHGEQTR IAGQPELSLH LSIGISVYPD DATGADELVQ
HAETALMAAK AQGQHGYRFF TASMNERARA QRRIETGLRQ ALPGNQLKLH YQPKVDAHSG
RIVGAEALLR WQLNGRDLYK PDQFIPVAED SGLILPIGAW VLRQACRQAR MWQQAGHEIP
ISVNVSPLQF QHADFYTWLD DVLEEAGLES RLLELELTER MVMSGGEATT GLLQRIKHRG
VRLSLDDFGT GYCSLSYLKH FPIDALKIDR MFVRDIISDH DTATITSAII AMARSLNKDV
IAEGVETREQ GSFLRHAGCS QLQGFLYGMP MPASELQKLL AEPVSAP
//
