ID I4VRP8_9GAMM Unreviewed; 285 AA.
AC I4VRP8;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:EIL89889.1};
GN ORFNames=UU9_07923 {ECO:0000313|EMBL:EIL89889.1};
OS Rhodanobacter fulvus Jip2.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Rhodanobacteraceae; Rhodanobacter.
OX NCBI_TaxID=1163408 {ECO:0000313|EMBL:EIL89889.1, ECO:0000313|Proteomes:UP000004210};
RN [1] {ECO:0000313|EMBL:EIL89889.1, ECO:0000313|Proteomes:UP000004210}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Jip2T {ECO:0000313|Proteomes:UP000004210};
RX PubMed=22843592; DOI=10.1128/JB.00871-12;
RA Kostka J.E., Green S.J., Rishishwar L., Prakash O., Katz L.S.,
RA Marino-Ramirez L., Jordan I.K., Munk C., Ivanova N., Mikhailova N.,
RA Watson D.B., Brown S.D., Palumbo A.V., Brooks S.C.;
RT "Genome sequences for six rhodanobacter strains, isolated from soils and
RT the terrestrial subsurface, with variable denitrification capabilities.";
RL J. Bacteriol. 194:4461-4462(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIL89889.1}.
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DR EMBL; AJXU01000030; EIL89889.1; -; Genomic_DNA.
DR RefSeq; WP_007081222.1; NZ_AJXU01000030.1.
DR AlphaFoldDB; I4VRP8; -.
DR STRING; 1163408.UU9_07923; -.
DR PATRIC; fig|1163408.3.peg.1622; -.
DR eggNOG; COG1737; Bacteria.
DR OrthoDB; 3684496at2; -.
DR Proteomes; UP000004210; Unassembled WGS sequence.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF17; HTH-TYPE TRANSCRIPTIONAL REGULATOR MURR; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000004210}.
FT DOMAIN 1..77
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
FT DOMAIN 124..259
FT /note="SIS"
FT /evidence="ECO:0000259|PROSITE:PS51464"
FT REGION 75..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 285 AA; 31064 MW; 412C420F4010DF0D CRC64;
MSPLVKIRSE RDRMSAVERR IADFILENAQ LLRDYSSQQL ANALGISQSS VVKFTQKLGF
KGYPDLKYSV GEANARADNG DAPEHAASPD GGSPGAFAGN LWRRKSEAEE ATRLINPAET
IEAVAAAIGQ AGQSGKVFII GLGEDDIYAR GFALKLSLLG ILTVHNFDTA RMTANISAAT
AGDVLLVFSE HGNHPALCKI ARYFRERRGQ VITVTRHTAN PLRTLADIAL VVSAHDELPY
IQPLLYQSAL QHLLDGLFVL LCEGHDDRHA QLLANLDRIQ LMLEP
//
