ID I7K6V9_9CLOT Unreviewed; 924 AA.
AC I7K6V9;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:CCJ33274.1};
GN ORFNames=CAAU_1190 {ECO:0000313|EMBL:CCJ33274.1};
OS Caloramator australicus RC3.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Caloramator.
OX NCBI_TaxID=857293 {ECO:0000313|EMBL:CCJ33274.1, ECO:0000313|Proteomes:UP000007652};
RN [1] {ECO:0000313|EMBL:CCJ33274.1, ECO:0000313|Proteomes:UP000007652}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RC3 {ECO:0000313|EMBL:CCJ33274.1,
RC ECO:0000313|Proteomes:UP000007652};
RX PubMed=21421756; DOI=10.1128/JB.00193-11;
RA Ogg C.D., Patel B.K.C.;
RT "Draft genome sequence of Caloramator australicus strain RC3T, a
RT thermoanaerobe from the Great Artesian Basin of Australia.";
RL J. Bacteriol. 193:2664-2665(2011).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCJ33274.1}.
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DR EMBL; CAKP01000066; CCJ33274.1; -; Genomic_DNA.
DR RefSeq; WP_008908544.1; NZ_CAKP01000066.1.
DR AlphaFoldDB; I7K6V9; -.
DR STRING; 857293.CAAU_1190; -.
DR eggNOG; COG5001; Bacteria.
DR OrthoDB; 9762141at2; -.
DR Proteomes; UP000007652; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 6.10.340.10; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR007892; CHASE4.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF2; CYCLIC DI-GMP PHOSPHODIESTERASE PDER; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF05228; CHASE4; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13426; PAS_9; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000007652};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..30
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 266..288
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 378..424
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 524..657
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 666..920
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
FT COILED 334..372
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 924 AA; 107970 MW; 8BB5812AC8D2B5B7 CRC64;
MRLKYKILKT IVLNILAYFL FIIFFQSFYI RPKFKMFMES IISNEIQREM DLLEKELELL
HVTTRDYAIW DESYDFVIYK HKDYIEKNYS FASLKNIGVS LAAILDNNGN LIYGITRKNE
EIKDYFDEGL LDKFILTGLH KSNFVGFLEF DKDIYCFAGE GIHKSDGTGD RKGIIIFGKR
LDEIKLNTQS KYEFINLLDL NKNELDKIEG LIKSKNKVKI SQKEVILTIE NKDTYVAYYP
IKDLTGNLLF LFKIYVPKDM ENKIEYMGIV IALTILLFGV LIVLILNFKF SKLINKPLEQ
IMNNIKDFTY KMENKLNIDL YGRKDEISDL AKSIDILKSE IIAKQNNLED INRRLEIRVK
KRTKELKIKN KEILLSDKIL SETLEGVIIL DSDKRILKVN KAIKNMFGFK EEDLIQNKID
ILNFEFDNIN FHNIFDIVQQ KGYWRGEARI YNKNDVSLPV WLSATFLQFN GYKVYILILS
DISKLKEKEE ELEKLAYYDL LTNLPNRNFF MKKLKEIIDD TICKSFALLF IDLDGFKVIN
DTLGHDIGDK VLINVADRII SCIDKGDIVF RLGEDEFIVL TFNIDNEYKV RDFANKIINE
ISKPLFINNF DIKASASIGI VKYPKDDITF EGLLRKVDAT LYEVKEKEKG GFLFFSQEIE
KKNKKFREIE TGLRRALVNN ELRLYIQPIF RESNNGEFVI TKGELLLRWI RNNRIVYPPD
EFIKVAEKNG MIVDVGNWIL KEAYRIRQKL IEKGIYIDLC INISAKQLEN KDFLNNIKYL
FDEKNILENW IFEITENVLI RDFNISTHIF KEVKKLGIKI ALDDFGTGYS SINYLSQLPI
DYIKIDRSFI SKAGQDGFNG VILAITSMAK SLGVKTVAEG VENKEQLKLL RNLGCDEFQG
YFFSKPIDVE EFIRNLNLLN KIKI
//