ID I9DSC8_9ALTE Unreviewed; 281 AA.
AC I9DSC8;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=RpiR family transcriptional regulator {ECO:0000313|EMBL:EIW88980.1};
GN ORFNames=AGRI_09340 {ECO:0000313|EMBL:EIW88980.1};
OS Alishewanella agri BL06.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Alteromonadaceae; Alishewanella.
OX NCBI_TaxID=1195246 {ECO:0000313|EMBL:EIW88980.1, ECO:0000313|Proteomes:UP000035062};
RN [1] {ECO:0000313|EMBL:EIW88980.1, ECO:0000313|Proteomes:UP000035062}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BL06 {ECO:0000313|EMBL:EIW88980.1,
RC ECO:0000313|Proteomes:UP000035062};
RX PubMed=22933763; DOI=10.1128/JB.01129-12;
RA Kim J., Jung J., Sung J.S., Chun J., Park W.;
RT "Genome Sequence of Pectin-Degrading Alishewanella agri, Isolated from
RT Landfill Soil.";
RL J. Bacteriol. 194:5135-5136(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIW88980.1}.
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DR EMBL; AKKU01000015; EIW88980.1; -; Genomic_DNA.
DR RefSeq; WP_008984715.1; NZ_AKKU01000015.1.
DR AlphaFoldDB; I9DSC8; -.
DR STRING; 1195246.AGRI_09340; -.
DR PATRIC; fig|1195246.3.peg.1841; -.
DR eggNOG; COG1737; Bacteria.
DR Proteomes; UP000035062; Unassembled WGS sequence.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF17; HTH-TYPE TRANSCRIPTIONAL REGULATOR MURR; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000035062}.
FT DOMAIN 1..77
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
FT DOMAIN 124..264
FT /note="SIS"
FT /evidence="ECO:0000259|PROSITE:PS51464"
SQ SEQUENCE 281 AA; 30939 MW; 5C3D47861D2CC441 CRC64;
MLSLLKIKGM LDQLSASERK LADFILDNSH LLRDYSSQQL ADAVGISQSS VVKFCQKLGY
KGYPDLKLAI TEAVVTASTL QREPAESPSE LSNLGQLAEQ LQQSLWQSLR GLLSINPDAK
LQQAAQLLHQ AGQILLAGSA HSAVVAADMQ NRLLELGKLA LFHSDPALSL QLARTLPAGS
VVMLISDSGE NADLLKLELY ARKRQLKIIS LTRFQTSAQS AVADITLFTL DTETDERLAR
LITQQSQQHL CHLLFLLLCQ CTAYRQQLTE HNKLLGLLEK N
//