ID J0K852_9BURK Unreviewed; 498 AA.
AC J0K852;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:EJE49765.1};
GN ORFNames=PMI14_05670 {ECO:0000313|EMBL:EJE49765.1};
OS Acidovorax sp. CF316.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Acidovorax.
OX NCBI_TaxID=1144317 {ECO:0000313|EMBL:EJE49765.1, ECO:0000313|Proteomes:UP000004811};
RN [1] {ECO:0000313|EMBL:EJE49765.1, ECO:0000313|Proteomes:UP000004811}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF316 {ECO:0000313|EMBL:EJE49765.1,
RC ECO:0000313|Proteomes:UP000004811};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJE49765.1}.
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DR EMBL; AKJX01000213; EJE49765.1; -; Genomic_DNA.
DR RefSeq; WP_007859144.1; NZ_AKJX01000213.1.
DR AlphaFoldDB; J0K852; -.
DR PATRIC; fig|1144317.3.peg.5218; -.
DR Proteomes; UP000004811; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000004811};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 498 AA; 53919 MW; AA2BA600BD86B147 CRC64;
MKKTFMGVRL RRLREERGMT QVALARALDL SASYLNQIEQ NQRPLTVPVL LKINAVFGVD
VQRFSDDDEA RLITGLREVL ADTPAEPGLD PEAVSLAEIR ELASGMPAVA RTLLALHQRH
RQALERLDAL SAQLGDGRSG ALASAGHQPM AYEEVRDFFF ARHNHFAELD DAAERLAADW
ALQPGRADEG LARRLQTAHG VHVVAVPELP GGAQRHYDPG SGVLQLAQGL EAGQRAFQMA
TQLAFLEMGP ELRRLADGAG LSGDQARALA RIGLANYFAG ALLLPYTAFL QAAEAVRYDI
DRLGHQFGVG FETVCHRLST LQRPSARGVP FFFIRVDRAG NISKRQSATH FHFSKIGGTC
PLWNVYEAFA QPGRIVPQLA RMPDGRAYLW VARTVSRGSG GAGGWGAPGK EFSVALGCDV
RHAAQLVYSR GLNLADPEAA VPIGMGCKVC EREACPQRAF PPIGQVLDVN ENRSRFAPYP
VVVGGSPRVL ANPPPGVA
//
