ID   J0KQ40_9BURK            Unreviewed;       886 AA.
AC   J0KQ40;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 45.
DE   SubName: Full=Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJE53298.1};
GN   ORFNames=PMI14_02010 {ECO:0000313|EMBL:EJE53298.1};
OS   Acidovorax sp. CF316.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Comamonadaceae; Acidovorax.
OX   NCBI_TaxID=1144317 {ECO:0000313|EMBL:EJE53298.1, ECO:0000313|Proteomes:UP000004811};
RN   [1] {ECO:0000313|EMBL:EJE53298.1, ECO:0000313|Proteomes:UP000004811}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CF316 {ECO:0000313|EMBL:EJE53298.1,
RC   ECO:0000313|Proteomes:UP000004811};
RX   PubMed=23045501; DOI=10.1128/JB.01243-12;
RA   Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA   Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT   "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT   sequences from diverse bacteria isolated from the rhizosphere and
RT   endosphere of Populus deltoides.";
RL   J. Bacteriol. 194:5991-5993(2012).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJE53298.1}.
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DR   EMBL; AKJX01000095; EJE53298.1; -; Genomic_DNA.
DR   RefSeq; WP_007852854.1; NZ_AKJX01000095.1.
DR   AlphaFoldDB; J0KQ40; -.
DR   PATRIC; fig|1144317.3.peg.1699; -.
DR   Proteomes; UP000004811; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   CDD; cd01948; EAL; 1.
DR   CDD; cd01949; GGDEF; 1.
DR   CDD; cd18773; PDC1_HK_sensor; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 3.20.20.450; EAL domain; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 2.
DR   InterPro; IPR001633; EAL_dom.
DR   InterPro; IPR035919; EAL_sf.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   NCBIfam; TIGR00254; GGDEF; 1.
DR   PANTHER; PTHR44757:SF2; BIOFILM ARCHITECTURE MAINTENANCE PROTEIN MBAA; 1.
DR   PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR   Pfam; PF00563; EAL; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF12860; PAS_7; 1.
DR   SMART; SM00052; EAL; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SUPFAM; SSF141868; EAL domain-like; 1.
DR   SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS50883; EAL; 1.
DR   PROSITE; PS50887; GGDEF; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000004811};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        12..33
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        286..306
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          481..619
FT                   /note="GGDEF"
FT                   /evidence="ECO:0000259|PROSITE:PS50887"
FT   DOMAIN          628..882
FT                   /note="EAL"
FT                   /evidence="ECO:0000259|PROSITE:PS50883"
SQ   SEQUENCE   886 AA;  97526 MW;  0B20ED8EA6DDF2B7 CRC64;
     MNPSSPARIK IYVSGAVAFF LASVALVAAT LVWNARQVAL ADSATQATRF VAGAEAALNR
     SLLSVDVLLA SMDELLGLST AMVEWIDSDG ASQRLRSSAR QNLMVRYVAL VDAQGKVVAS
     SDAAGSRLAL DLPAGFLDEV LNQSVSTLMV SQPVVSFASA EKVLYFARHL KMADSSRVVA
     LAELPVASLS SVLVQGVDIS GLQVTLERAG GQMLLSVPGR EDVVTHTLSP PLDTLDESGP
     HWRAPARLSG EVALVVYRPI LYQDLRISAS IPQRDALASW RTERNAVGLT ALAFLAMILA
     AGVFALRYID RMMQARLAIA QSKATLDQAL ESMVSGFVLL DGLQRVVQWN RRFEEIFPWL
     QPILAPQVPF RRVLEEKARH HLPHASDSER ALWIEHRLAL QLQPQGPHEQ SLPDGRVIQI
     TERVTPESGL VITYHDVTEL RQASAEIESL AFFDPLTNLP NRRLLMDRMQ QATAASVRSG
     QHGALLFLDL DHFKTLNDTL GHEVGDMLLR QVAQRLKTCV RREDTVARLG GDEFVVMLSD
     LSEHSSEAAA YARRVGQKIL RKLNQPYTLG THTYHSTPSI GATLMGGAMQ PSVDLLKQAD
     IAMYQVKSQG RNALCFFDPQ MQIAISQRAQ LESDLQAALT GRQFVLHYQP QFHLDGRIVG
     AEALIRWRHP ERGLITPGHF IGVAEESELI VPMGHWVLRT ACEQLAAWQG DPRYRHVQLS
     VNVSARQFRQ RDFVARVVEV LRETGARPHL LKLELTESLV LDNVDDTIAK MGLLKTKGVR
     FSVDDFGTGY SSLAYLTRLP LDQLKIDQSF VRNLGVKHTD DVIVQTIIGM ARNLELDVIA
     EGVETQAQKD FLALHGCQFF QGYLMGRPVP VADLESLLGA SSAALA
//