ID J1ASE6_9EURY Unreviewed; 379 AA.
AC J1ASE6;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=Metli_2026 {ECO:0000313|EMBL:EJG07968.1};
OS Methanofollis liminatans DSM 4140.
OC Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC Methanomicrobiales; Methanomicrobiaceae; Methanofollis.
OX NCBI_TaxID=28892 {ECO:0000313|EMBL:EJG07968.1};
RN [1] {ECO:0000313|EMBL:EJG07968.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 4140 {ECO:0000313|EMBL:EJG07968.1};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L.,
RA Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Lu M., Detter J.C.,
RA Tapia R., Han C., Land M., Hauser L., Markowitz V., Cheng J.-F.,
RA Hugenholtz P., Woyke T., Wu D., Spring S., Schuler E., Brambilla E.,
RA Klenk H.-P., Eisen J.A.;
RT "The complete genome of Methanofollis liminatans DSM 4140.";
RL Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CM001555; EJG07968.1; -; Genomic_DNA.
DR AlphaFoldDB; J1ASE6; -.
DR STRING; 28892.Metli_2026; -.
DR HOGENOM; CLU_057454_0_1_2; -.
DR OrthoDB; 78367at2157; -.
DR Proteomes; UP000005095; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.10.2910; -; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR PANTHER; PTHR43236; ANTITOXIN HIGA1; 1.
DR PANTHER; PTHR43236:SF2; HTH CRO_C1-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
FT DOMAIN 18..69
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
FT REGION 311..336
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 312..336
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 379 AA; 43528 MW; DA4B2522091AA8EF CRC64;
MRKRSPNIRI KPDIFRWLRE SSGWTLEDVS NHLNVSVEWV LKWERGEKEP TLNEIKNLSK
AYKRPLAAFF LPAPESELPL PQDFRRLPGQ QRPLSKKTIL AIRKARNLQV ICTELMTNVD
IPVDPDVIRA QLSDDAEDIA LRERDRFGIW IEDQHPWHNP YEAFKNWRDL IEHKNIRVFQ
FPMELEELRG VALMDSKPYA IVINSSDTIQ ARIFTLFHEY GHILLHEPAL CTPENPMTGD
SHGAKVESWC NHFAGAFLLP QESIRGDFAR CGLHGYSRIA ARYKVSLSTV LTRLVSLHLI
SQNQYLSEMR KLSGESSDKE DQAGGGGESS ARRAQRERGE VFVSLVLENT QRGLITSSRA
LDYLDIKTKH LGELTKQKP
//
