ID J1EKL4_9BURK Unreviewed; 309 AA.
AC J1EKL4;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EJE52816.1};
GN ORFNames=PMI14_02482 {ECO:0000313|EMBL:EJE52816.1};
OS Acidovorax sp. CF316.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Acidovorax.
OX NCBI_TaxID=1144317 {ECO:0000313|EMBL:EJE52816.1, ECO:0000313|Proteomes:UP000004811};
RN [1] {ECO:0000313|EMBL:EJE52816.1, ECO:0000313|Proteomes:UP000004811}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF316 {ECO:0000313|EMBL:EJE52816.1,
RC ECO:0000313|Proteomes:UP000004811};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJE52816.1}.
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DR EMBL; AKJX01000104; EJE52816.1; -; Genomic_DNA.
DR RefSeq; WP_007854090.1; NZ_AKJX01000104.1.
DR AlphaFoldDB; J1EKL4; -.
DR PATRIC; fig|1144317.3.peg.2170; -.
DR Proteomes; UP000004811; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30427; TRANSCRIPTIONAL ACTIVATOR PROTEIN LYSR; 1.
DR PANTHER; PTHR30427:SF1; TRANSCRIPTIONAL ACTIVATOR PROTEIN LYSR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000004811}.
FT DOMAIN 1..58
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 309 AA; 32909 MW; 12DA7CEDBDA0E7E1 CRC64;
MRLRHIEVFN AVMLTGSVSA AARLINVTQP AVSRILAHAE LQLGFALFHR LKGRLVPTTE
AQTLYPHIER LFAQLDDVQR LAASLKGDRR EGALHILTVL ALSYEVLPRA LRSFRALHPD
VDVTIDALHS PQIVSALVLQ EADVGFVFSS IAHPSLSQEH IADGYMVCVA PKGMLGPALV
QAGSVHLTDL ADTPVVRLDV RDPIGTVMGH ACREAGVGLR TAITVQTYHA ALALAQHGHA
VALVDACTAA SADRSQVDVL ALAPHIPVPI QSLRTVNRPA SLLASAMAAC MRLAVAETMA
SKGLPSPRP
//
