ID J2DT38_9SPHN Unreviewed; 297 AA.
AC J2DT38;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EJK86282.1};
GN ORFNames=PMI04_00480 {ECO:0000313|EMBL:EJK86282.1};
OS Sphingobium sp. AP49.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1144307 {ECO:0000313|EMBL:EJK86282.1};
RN [1] {ECO:0000313|EMBL:EJK86282.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AP49 {ECO:0000313|EMBL:EJK86282.1};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK86282.1}.
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DR EMBL; AJVL01000008; EJK86282.1; -; Genomic_DNA.
DR RefSeq; WP_007705230.1; NZ_CP124576.1.
DR AlphaFoldDB; J2DT38; -.
DR STRING; 1144307.PMI04_00480; -.
DR PATRIC; fig|1144307.3.peg.446; -.
DR eggNOG; COG0583; Bacteria.
DR OrthoDB; 9813056at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08474; PBP2_CrgA_like_5; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR PGRR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
FT DOMAIN 11..61
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 297 AA; 32490 MW; 3E5AD257A74C1229 CRC64;
MSKHGLIEFD AVLAIARRAS FRAAALELGL STTALSNAIG KLEGQLGVRL FNRTTRSVSL
TDAGRNFVEQ VGPAVSTLHE AMGAARSQQE TPSGTLRINA FATGAREILG PLLLKFLRHY
PKVHIDLVTE GRIVDIVAEG FDLGLRTANL VPTDMIAIPV GPPRSFAVVA SPEYFEANDK
PRTPPDLLHH SCLRIRLPNG ALHRWHFEKN GQPVLIDVSG PITLDEASLS RIAVLDHVGI
GYFMEIDVRD DIQAGRLIRV LEDWTPPLAP LCLYYPSRRN ASAAFRALIE MARQSPV
//
