GenomeNet

Database: UniProt
Entry: J2L2S2_9SPHN
LinkDB: J2L2S2_9SPHN
Original site: J2L2S2_9SPHN 
ID   J2L2S2_9SPHN            Unreviewed;        80 AA.
AC   J2L2S2;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   RecName: Full=UPF0335 protein PMI04_02899 {ECO:0000256|HAMAP-Rule:MF_00797};
GN   ORFNames=PMI04_02899 {ECO:0000313|EMBL:EJK81651.1};
OS   Sphingobium sp. AP49.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=1144307 {ECO:0000313|EMBL:EJK81651.1};
RN   [1] {ECO:0000313|EMBL:EJK81651.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=AP49 {ECO:0000313|EMBL:EJK81651.1};
RX   PubMed=23045501; DOI=10.1128/JB.01243-12;
RA   Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA   Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT   "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT   sequences from diverse bacteria isolated from the rhizosphere and
RT   endosphere of Populus deltoides.";
RL   J. Bacteriol. 194:5991-5993(2012).
CC   -!- SIMILARITY: Belongs to the UPF0335 family. {ECO:0000256|HAMAP-
CC       Rule:MF_00797}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJK81651.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AJVL01000061; EJK81651.1; -; Genomic_DNA.
DR   RefSeq; WP_004210171.1; NZ_CP124576.1.
DR   AlphaFoldDB; J2L2S2; -.
DR   STRING; 1144307.PMI04_02899; -.
DR   PATRIC; fig|1144307.3.peg.2662; -.
DR   eggNOG; COG3750; Bacteria.
DR   OrthoDB; 9813793at2; -.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   HAMAP; MF_00797; UPF0335; 1.
DR   InterPro; IPR018753; GapR-like.
DR   InterPro; IPR046367; GapR-like_DNA-bd.
DR   Pfam; PF10073; GapR_DNA-bd; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|SAM:Coils}.
FT   DOMAIN          7..78
FT                   /note="GapR-like DNA-binding"
FT                   /evidence="ECO:0000259|Pfam:PF10073"
FT   COILED          4..38
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   80 AA;  9318 MW;  129709BE76331915 CRC64;
     MSEGNIAADQ LRLLIERIER LEEEKKGIGD DIKDVYLEAK ATGYDPKIMR QIIRLRKMQP
     HDRQEMEAIL QTYLSALGME
//
DBGET integrated database retrieval system