ID J2PT28_9SPHN Unreviewed; 220 AA.
AC J2PT28;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:EJL30867.1};
GN ORFNames=PMI02_01933 {ECO:0000313|EMBL:EJL30867.1};
OS Novosphingobium sp. AP12.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=1144305 {ECO:0000313|EMBL:EJL30867.1, ECO:0000313|Proteomes:UP000007515};
RN [1] {ECO:0000313|EMBL:EJL30867.1, ECO:0000313|Proteomes:UP000007515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AP12 {ECO:0000313|EMBL:EJL30867.1,
RC ECO:0000313|Proteomes:UP000007515};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJL30867.1}.
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DR EMBL; AKKE01000049; EJL30867.1; -; Genomic_DNA.
DR AlphaFoldDB; J2PT28; -.
DR STRING; 1144305.PMI02_01933; -.
DR PATRIC; fig|1144305.3.peg.1862; -.
DR eggNOG; COG1396; Bacteria.
DR OrthoDB; 9805356at2; -.
DR Proteomes; UP000007515; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd02209; cupin_XRE_C; 1.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR013096; Cupin_2.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF1; METHYLPHOSPHONATE SYNTHASE; 1.
DR Pfam; PF07883; Cupin_2; 1.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007515}.
FT DOMAIN 41..95
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 220 AA; 23964 MW; D40F18D07BEFFC12 CRC64;
MQPRVTHISS NISKSSHVLT TGSTAPAPIE RDLEKAIGSQ IRSQRRRHDL SIADLASAAS
ISTGMLSKIE NGGISPSLAT LQSISTALQV PLSSLFAAFE ERQDCSHVPA GQGLTIERRG
TKVGHVYQLL GHMLRGDVAM EPYLITLREG AAPYTSFHHQ GVEFIHMLKG ELTYRHGTET
YLMRAGDSLL FDSSALHGPE AVESRETEYL SIIVYPRPAT
//
