ID J2U8K3_9BURK Unreviewed; 335 AA.
AC J2U8K3;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJL87517.1};
GN ORFNames=PMI16_02861 {ECO:0000313|EMBL:EJL87517.1};
OS Herbaspirillum sp. CF444.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Herbaspirillum.
OX NCBI_TaxID=1144319 {ECO:0000313|EMBL:EJL87517.1, ECO:0000313|Proteomes:UP000007296};
RN [1] {ECO:0000313|EMBL:EJL87517.1, ECO:0000313|Proteomes:UP000007296}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF444 {ECO:0000313|EMBL:EJL87517.1,
RC ECO:0000313|Proteomes:UP000007296};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJL87517.1}.
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DR EMBL; AKJW01000062; EJL87517.1; -; Genomic_DNA.
DR RefSeq; WP_007880579.1; NZ_AKJW01000062.1.
DR AlphaFoldDB; J2U8K3; -.
DR STRING; 1144319.PMI16_02861; -.
DR PATRIC; fig|1144319.3.peg.2902; -.
DR eggNOG; COG4977; Bacteria.
DR OrthoDB; 9794896at2; -.
DR Proteomes; UP000007296; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd03137; GATase1_AraC_1; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002818; DJ-1/PfpI.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR PANTHER; PTHR43130; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43130:SF3; THIJ_PFPI FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14240); 1.
DR Pfam; PF01965; DJ-1_PfpI; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:EJL87517.1}.
FT DOMAIN 233..332
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 335 AA; 37019 MW; 07C2EF5D04FE6EC8 CRC64;
MTHIPEFLPH RVKPRQILFV AYPDMGLLDA TGPQTVFWAA SKAMEKRGLP GYLRHIASLA
GGLMHTAEGA AIDTARMTDF DLADIDTIVV PGSPHIVQVL DACEALIGWL QQASSAVRRT
ASVCSGTFLL AQAGLLDGRR AATHWAMCDM LTERFPAVEI DRDAIFVQQD TLWTSAGVSA
GIDLALALVE QDCGREVAME AAREMVVFLK RPGGQAQFSE LLQSQTQGSS AFDELHTWIG
NNLGSRNLTV EALAERARMS PRNFARTYKQ ETGRTPAKAV EIFRLEAARR LLEDSSHNID
QIADKCGFGD EERMRTTFQR NLGVAPRDYR KRFSR
//
