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Database: UniProt
Entry: J2V7G8_9BURK
LinkDB: J2V7G8_9BURK
Original site: J2V7G8_9BURK 
ID   J2V7G8_9BURK            Unreviewed;       487 AA.
AC   J2V7G8;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   24-JAN-2024, entry version 42.
DE   RecName: Full=Ribonuclease G {ECO:0000256|ARBA:ARBA00017719};
GN   ORFNames=PMI40_03264 {ECO:0000313|EMBL:EJN01777.1};
OS   Herbaspirillum sp. YR522.
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Oxalobacteraceae; Herbaspirillum.
OX   NCBI_TaxID=1144342 {ECO:0000313|EMBL:EJN01777.1, ECO:0000313|Proteomes:UP000007507};
RN   [1] {ECO:0000313|EMBL:EJN01777.1, ECO:0000313|Proteomes:UP000007507}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=YR522 {ECO:0000313|EMBL:EJN01777.1,
RC   ECO:0000313|Proteomes:UP000007507};
RX   PubMed=23045501; DOI=10.1128/JB.01243-12;
RA   Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA   Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT   "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT   sequences from diverse bacteria isolated from the rhizosphere and
RT   endosphere of Populus deltoides.";
RL   J. Bacteriol. 194:5991-5993(2012).
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000256|ARBA:ARBA00001946};
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC   -!- SIMILARITY: Belongs to the RNase E/G family. RNase G subfamily.
CC       {ECO:0000256|ARBA:ARBA00005663}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJN01777.1}.
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DR   EMBL; AKJA01000109; EJN01777.1; -; Genomic_DNA.
DR   RefSeq; WP_008116951.1; NZ_AKJA01000109.1.
DR   AlphaFoldDB; J2V7G8; -.
DR   STRING; 1144342.PMI40_03264; -.
DR   PATRIC; fig|1144342.3.peg.3001; -.
DR   eggNOG; COG1530; Bacteria.
DR   OrthoDB; 9804278at2; -.
DR   Proteomes; UP000007507; Unassembled WGS sequence.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0004540; F:RNA nuclease activity; IEA:InterPro.
DR   GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR   CDD; cd04453; S1_RNase_E; 1.
DR   Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR   Gene3D; 3.40.1260.20; Ribonuclease E, catalytic domain; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR019307; RNA-bd_AU-1/RNase_E/G.
DR   InterPro; IPR004659; RNase_E/G.
DR   InterPro; IPR048583; RNase_E_G_thioredoxin-like.
DR   InterPro; IPR003029; S1_domain.
DR   NCBIfam; TIGR00757; RNaseEG; 1.
DR   PANTHER; PTHR30001; RIBONUCLEASE; 1.
DR   PANTHER; PTHR30001:SF0; RIBONUCLEASE G; 1.
DR   Pfam; PF10150; RNase_E_G; 1.
DR   Pfam; PF20833; RNase_E_G_Thio; 1.
DR   SMART; SM00316; S1; 1.
DR   SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR   PROSITE; PS50126; S1; 1.
PE   3: Inferred from homology;
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007507};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT   DOMAIN          39..118
FT                   /note="S1 motif"
FT                   /evidence="ECO:0000259|PROSITE:PS50126"
SQ   SEQUENCE   487 AA;  54900 MW;  3EDAAC16A04A45E6 CRC64;
     MSEDILINIT PQETRVALIL QGAVQELHIE RTLSRGLAGN IYLGKVVRVL PGMQSAFIDI
     GLERAAFLHV ADIWEARPHD GQNTPAIPIE KLLHDGQTVT VQVIKDPIGT KGARLSTQIS
     IAGRMLVYLP QDKHIGISQR IENEAERELL RSKVQALLPP EEKGGFIIRT MAEDASDADL
     QMDVEYLRKT WATIVKQSKT RPAATLLHQD LSLAQRVLRD FVGDDTATIQ VDSRENFNKL
     QEFGTIYTPS VLTKLTHYRG ERPLFDLYGV EEEIERALGR RVDLKSGGYL IVDQTEAMTT
     IDVNTGSFVN GRNFDDTIFK TNLEAAHAIA RQLRLRNLGG IIILDFIDME NTEHRQAVLA
     ELGRALQRDR TKISVSGFST LGLVEMTRKR TRESLAHILC ETCPACKGRG QVKTSRTVCY
     EILREVMREA KQFNPREFRI LASQLVVDLF LEEESQHLAM LGDFIGKPIS LQVQSDYQQE
     QYDIILM
//
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