ID J2VNX4_9BURK Unreviewed; 544 AA.
AC J2VNX4;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJN07842.1};
GN ORFNames=PMI40_01595 {ECO:0000313|EMBL:EJN07842.1};
OS Herbaspirillum sp. YR522.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Herbaspirillum.
OX NCBI_TaxID=1144342 {ECO:0000313|EMBL:EJN07842.1, ECO:0000313|Proteomes:UP000007507};
RN [1] {ECO:0000313|EMBL:EJN07842.1, ECO:0000313|Proteomes:UP000007507}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YR522 {ECO:0000313|EMBL:EJN07842.1,
RC ECO:0000313|Proteomes:UP000007507};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJN07842.1}.
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DR EMBL; AKJA01000044; EJN07842.1; -; Genomic_DNA.
DR RefSeq; WP_008113769.1; NZ_AKJA01000044.1.
DR AlphaFoldDB; J2VNX4; -.
DR STRING; 1144342.PMI40_01595; -.
DR PATRIC; fig|1144342.3.peg.1510; -.
DR eggNOG; COG0747; Bacteria.
DR OrthoDB; 9801799at2; -.
DR Proteomes; UP000007507; Unassembled WGS sequence.
DR GO; GO:0043190; C:ATP-binding cassette (ABC) transporter complex; IEA:InterPro.
DR GO; GO:0030288; C:outer membrane-bounded periplasmic space; IEA:UniProt.
DR GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR CDD; cd08517; PBP2_NikA_DppA_OppA_like_13; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 1.
DR InterPro; IPR030678; Peptide/Ni-bd.
DR InterPro; IPR039424; SBP_5.
DR InterPro; IPR000914; SBP_5_dom.
DR InterPro; IPR006311; TAT_signal.
DR PANTHER; PTHR30290:SF38; D,D-DIPEPTIDE-BINDING PERIPLASMIC PROTEIN DDPA-RELATED; 1.
DR PANTHER; PTHR30290; PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER; 1.
DR Pfam; PF00496; SBP_bac_5; 1.
DR PIRSF; PIRSF002741; MppA; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR PROSITE; PS51318; TAT; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007507};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..34
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 35..544
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003757131"
FT DOMAIN 90..454
FT /note="Solute-binding protein family 5"
FT /evidence="ECO:0000259|Pfam:PF00496"
SQ SEQUENCE 544 AA; 60348 MW; DB8AA8BBF26A693C CRC64;
MSKQVPSRRH FLLHSACGAV LAASYAWSPL AAQAAQGAQA AAPRRGGTLV ASWGGLEPQA
LFVPGGGGSS PFQTSTKILE RLLKLDEKLE FQPVLAESIT PSADFRQYTI KLRQGVKWHD
GADFDAKDVV FNFIHHWKPI SAGVALKSLS RVEASDAHTV VLHFDQPTPE FFLKSILAGQ
YQLVVPRHLY EGRDLITNPL NNTPVGTGPW KYGQWVRGSH VQYARNQNYW RPGRPYLDKL
IIRWWGDPAS RAAALETGEL SVAYSSPVPA RDIDRLLKTG KVVLDTRGYE NSAWTSTLEF
NQRREHVKRR EVRQAILYAI NRQFIVDTIY YGRGKPAISP IFSSNTQFFT EDVPRYPFDP
KKAGALLDAA GLPLKDGRRF TVNLVAAAWF EENAKLGQYL KQALEDIGIG VKLDSVDRAT
ALKRIYGDYD YDIAISNFTA PLEPVPIVTQ FFTTDGIVKG AAFRNATGYS SREMDALVTR
LMVETDPRAR KKLAADFARL ASTDVPIVPL VEIQAFTLAN RKVRNATTGA NAQGEALDDA
WLDS
//
