ID J2WG85_9SPHN Unreviewed; 417 AA.
AC J2WG85;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE RecName: Full=HTH tetR-type domain-containing protein {ECO:0000259|PROSITE:PS50977};
GN ORFNames=PMI04_02928 {ECO:0000313|EMBL:EJK81680.1};
OS Sphingobium sp. AP49.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1144307 {ECO:0000313|EMBL:EJK81680.1};
RN [1] {ECO:0000313|EMBL:EJK81680.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AP49 {ECO:0000313|EMBL:EJK81680.1};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK81680.1}.
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DR EMBL; AJVL01000061; EJK81680.1; -; Genomic_DNA.
DR AlphaFoldDB; J2WG85; -.
DR STRING; 1144307.PMI04_02928; -.
DR PATRIC; fig|1144307.3.peg.2691; -.
DR eggNOG; ENOG503448G; Bacteria.
DR OrthoDB; 7182470at2; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.357.10; Tetracycline Repressor, domain 2; 2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001647; HTH_TetR.
DR PANTHER; PTHR30055; HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR; 1.
DR PANTHER; PTHR30055:SF164; TRANSCRIPTIONAL REPRESSOR MCE3R; 1.
DR Pfam; PF00440; TetR_N; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS50977; HTH_TETR_2; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00335}.
FT DOMAIN 13..73
FT /note="HTH tetR-type"
FT /evidence="ECO:0000259|PROSITE:PS50977"
FT DOMAIN 225..285
FT /note="HTH tetR-type"
FT /evidence="ECO:0000259|PROSITE:PS50977"
FT DNA_BIND 36..55
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00335"
FT DNA_BIND 248..267
FT /note="H-T-H motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00335"
SQ SEQUENCE 417 AA; 45922 MW; 7464070F9090860C CRC64;
MATASNLEKT PETGAMQRLV QAVLDIWECE GASGASARAI SRLAQTPVSG IYHHFGSLEQ
LFLSAHEQAQ RDSERWCAAR LAELDGVLPL SRDAFPTLLA ALIDQWCETE RRLAFAWREC
QLIAARELHY APVCDRWAAM WRAFWEEVCT RCGHPGRGAH TAYLFDGEAS LHLMRWRRPV
DRAGLEEMCA GWNDWLCGRP VRDSDWRRFA REQADLALPE PTITSGTMEQ IADAAADVLA
LDGMAALTHR AVAARAGLTL GVVSYNFRSS AELVRAAFEM IYRKVVASGG WTPPPEAAIM
TDEELFARYS NPPPRNDRIL PALDELMLAA ARDADLRDFA PQLRYRRGRT SGGLLRAILG
RDISPLEAAL FSGFVSGHRK TCFSMTAGEA AQAGARAMLD LRTMLGTTAA STQAKSA
//
