GenomeNet

Database: UniProt
Entry: J3CDI0_9RHIZ
LinkDB: J3CDI0_9RHIZ
Original site: J3CDI0_9RHIZ 
ID   J3CDI0_9RHIZ            Unreviewed;       452 AA.
AC   J3CDI0;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   31-JUL-2019, entry version 26.
DE   SubName: Full=P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EJN03474.1};
GN   ORFNames=PMI41_02468 {ECO:0000313|EMBL:EJN03474.1};
OS   Phyllobacterium sp. YR531.
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Phyllobacteriaceae; Phyllobacterium.
OX   NCBI_TaxID=1144343 {ECO:0000313|EMBL:EJN03474.1, ECO:0000313|Proteomes:UP000007283};
RN   [1] {ECO:0000313|EMBL:EJN03474.1, ECO:0000313|Proteomes:UP000007283}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=YR531 {ECO:0000313|EMBL:EJN03474.1,
RC   ECO:0000313|Proteomes:UP000007283};
RX   PubMed=23045501; DOI=10.1128/JB.01243-12;
RA   Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA   Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT   "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT   sequences from diverse bacteria isolated from the rhizosphere and
RT   endosphere of Populus deltoides.";
RL   J. Bacteriol. 194:5991-5993(2012).
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:EJN03474.1}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; AKIZ01000018; EJN03474.1; -; Genomic_DNA.
DR   RefSeq; WP_008125095.1; NZ_AKIZ01000018.1.
DR   STRING; 1144343.PMI41_02468; -.
DR   EnsemblBacteria; EJN03474; EJN03474; PMI41_02468.
DR   PATRIC; fig|1144343.3.peg.2518; -.
DR   OrthoDB; 708644at2; -.
DR   Proteomes; UP000007283; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0030255; P:protein secretion by the type IV secretion system; IEA:InterPro.
DR   InterPro; IPR014150; Conjugal_tfr_TrbL.
DR   InterPro; IPR007688; Conjugal_tfr_TrbL/VirB6.
DR   Pfam; PF04610; TrbL; 1.
DR   TIGRFAMs; TIGR02783; TrbL_P; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000007283};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007283};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     29     52       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     64     85       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    139    165       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    172    193       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    205    226       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    238    259       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    279    303       Helical. {ECO:0000256|SAM:Phobius}.
FT   REGION      350    452       Disordered. {ECO:0000256|SAM:MobiDB-
FT                                lite}.
FT   COMPBIAS    359    408       Polar. {ECO:0000256|SAM:MobiDB-lite}.
FT   COMPBIAS    420    452       Polar. {ECO:0000256|SAM:MobiDB-lite}.
SQ   SEQUENCE   452 AA;  45351 MW;  8B2C6562961A5465 CRC64;
     MGGTGVIDHF LEVFTRYIDS GFGLLSGEVA FIATTLIVID VTLAALFWSW GADDDIMARL
     VKKTLFVGVF AYLIGNWNNL ARIIFESFAG LGLKASGTGF TVADMMRPGR VAQTGLDAGR
     PLLDSISDLM GYWSFFENFI QIAVMLLAWA LVLLAFFILA IQLFVTLIEF KLTTLAGFVL
     IPFGLFGKSA FMAERVLGNV ISSGIKVLVL GVIIGIGSSL FSEFTAGFGG RTPTIDEAMA
     IVLAALTLLG LGIFGPGIAN GLVSGGPQLG AGAAVGTGLA AGGMVAAGAA TVGAVASGGA
     ALAGGAAAAA RGGAALTGGA STAYSLGAPG QTGASGVASG LGGVARAAGS AATSPLRRAA
     ERASSSMRSS FADGARSAFE STGGSSTMGT VGEAANDAAP TPSSSGDQPP AWARRMKRSQ
     QMSHAVSTTV HAVRSGDSHG GGSSINLSEG DR
//
DBGET integrated database retrieval system