ID J3DJM3_9BURK Unreviewed; 101 AA.
AC J3DJM3;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 55.
DE RecName: Full=Integration host factor subunit beta {ECO:0000256|ARBA:ARBA00018700, ECO:0000256|HAMAP-Rule:MF_00381};
DE Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};
GN Name=ihfB {ECO:0000256|HAMAP-Rule:MF_00381};
GN Synonyms=himD {ECO:0000256|HAMAP-Rule:MF_00381};
GN ORFNames=PMI16_00652 {ECO:0000313|EMBL:EJL93329.1};
OS Herbaspirillum sp. CF444.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Herbaspirillum.
OX NCBI_TaxID=1144319 {ECO:0000313|EMBL:EJL93329.1, ECO:0000313|Proteomes:UP000007296};
RN [1] {ECO:0000313|EMBL:EJL93329.1, ECO:0000313|Proteomes:UP000007296}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF444 {ECO:0000313|EMBL:EJL93329.1,
RC ECO:0000313|Proteomes:UP000007296};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- FUNCTION: This protein is one of the two subunits of integration host
CC factor, a specific DNA-binding protein that functions in genetic
CC recombination as well as in transcriptional and translational control.
CC {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}.
CC -!- SUBUNIT: Heterodimer of an alpha and a beta chain. {ECO:0000256|HAMAP-
CC Rule:MF_00381, ECO:0000256|RuleBase:RU003941}.
CC -!- SIMILARITY: Belongs to the bacterial histone-like protein family.
CC {ECO:0000256|ARBA:ARBA00010529, ECO:0000256|HAMAP-Rule:MF_00381,
CC ECO:0000256|RuleBase:RU003939}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJL93329.1}.
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DR EMBL; AKJW01000016; EJL93329.1; -; Genomic_DNA.
DR RefSeq; WP_007876341.1; NZ_AKJW01000016.1.
DR AlphaFoldDB; J3DJM3; -.
DR STRING; 1144319.PMI16_00652; -.
DR PATRIC; fig|1144319.3.peg.654; -.
DR eggNOG; COG0776; Bacteria.
DR OrthoDB; 9804203at2; -.
DR Proteomes; UP000007296; Unassembled WGS sequence.
DR GO; GO:0005694; C:chromosome; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0030527; F:structural constituent of chromatin; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-UniRule.
DR CDD; cd13836; IHF_B; 1.
DR Gene3D; 4.10.520.10; IHF-like DNA-binding proteins; 1.
DR HAMAP; MF_00381; IHF_beta; 1.
DR InterPro; IPR000119; Hist_DNA-bd.
DR InterPro; IPR010992; IHF-like_DNA-bd_dom_sf.
DR InterPro; IPR005685; IHF_beta.
DR NCBIfam; TIGR00988; hip; 1.
DR PANTHER; PTHR33175; DNA-BINDING PROTEIN HU; 1.
DR PANTHER; PTHR33175:SF5; INTEGRATION HOST FACTOR SUBUNIT BETA; 1.
DR Pfam; PF00216; Bac_DNA_binding; 1.
DR PRINTS; PR01727; DNABINDINGHU.
DR SMART; SM00411; BHL; 1.
DR SUPFAM; SSF47729; IHF-like DNA-binding proteins; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|HAMAP-Rule:MF_00381,
KW ECO:0000256|RuleBase:RU003941};
KW DNA-binding {ECO:0000256|HAMAP-Rule:MF_00381,
KW ECO:0000256|RuleBase:RU003941};
KW Transcription {ECO:0000256|HAMAP-Rule:MF_00381,
KW ECO:0000256|RuleBase:RU003941};
KW Transcription regulation {ECO:0000256|HAMAP-Rule:MF_00381,
KW ECO:0000256|RuleBase:RU003941};
KW Translation regulation {ECO:0000256|HAMAP-Rule:MF_00381,
KW ECO:0000256|RuleBase:RU003941}.
SQ SEQUENCE 101 AA; 11357 MW; C694176AA3063264 CRC64;
MTKSELIARL AERYPQLVAK DADYAVKTIL DAMVDALATG QRIEIRGFGS FALNRRPPRI
GRNPKSGDKV MVPEKRVPHF KPGKELRERV DAMVGQPIKE D
//
