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Database: UniProt
Entry: J3KHD3_COCIM
LinkDB: J3KHD3_COCIM
Original site: J3KHD3_COCIM 
ID   J3KHD3_COCIM            Unreviewed;       786 AA.
AC   J3KHD3;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 2.
DT   27-MAR-2024, entry version 49.
DE   RecName: Full=Carbon catabolite repression protein B {ECO:0000256|ARBA:ARBA00041962};
DE   AltName: Full=Deubiquitinating enzyme creB {ECO:0000256|ARBA:ARBA00042958};
DE   AltName: Full=Ubiquitin thioesterase creB {ECO:0000256|ARBA:ARBA00041772};
DE   AltName: Full=Ubiquitin-hydrolyzing enzyme creB {ECO:0000256|ARBA:ARBA00041870};
DE   AltName: Full=Ubiquitin-specific-processing protease creB {ECO:0000256|ARBA:ARBA00042086};
GN   ORFNames=CIMG_00618 {ECO:0000313|EMBL:EAS35264.3};
OS   Coccidioides immitis (strain RS) (Valley fever fungus).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC   Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX   NCBI_TaxID=246410 {ECO:0000313|EMBL:EAS35264.3, ECO:0000313|Proteomes:UP000001261};
RN   [1] {ECO:0000313|Proteomes:UP000001261}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RS {ECO:0000313|Proteomes:UP000001261};
RX   PubMed=19717792; DOI=10.1101/gr.087551.108;
RA   Sharpton T.J., Stajich J.E., Rounsley S.D., Gardner M.J., Wortman J.R.,
RA   Jordar V.S., Maiti R., Kodira C.D., Neafsey D.E., Zeng Q., Hung C.-Y.,
RA   McMahan C., Muszewska A., Grynberg M., Mandel M.A., Kellner E.M.,
RA   Barker B.M., Galgiani J.N., Orbach M.J., Kirkland T.N., Cole G.T.,
RA   Henn M.R., Birren B.W., Taylor J.W.;
RT   "Comparative genomic analyses of the human fungal pathogens Coccidioides
RT   and their relatives.";
RL   Genome Res. 19:1722-1731(2009).
RN   [2] {ECO:0000313|Proteomes:UP000001261}
RP   GENOME REANNOTATION.
RC   STRAIN=RS {ECO:0000313|Proteomes:UP000001261};
RX   PubMed=20516208; DOI=10.1101/gr.103911.109;
RA   Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA   Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA   Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA   FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA   Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA   Taylor J.W., Rounsley S.D.;
RT   "Population genomic sequencing of Coccidioides fungi reveals recent
RT   hybridization and transposon control.";
RL   Genome Res. 20:938-946(2010).
CC   -!- FUNCTION: Ubiquitin thioesterase component of the regulatory network
CC       controlling carbon source utilization through ubiquitination and
CC       deubiquitination involving creA, creB, creC, creD and acrB.
CC       Deubiquitinates the creA catabolic repressor and the quinate permease
CC       qutD. Also plays a role in response to carbon starvation and the
CC       control of extracellular proteases activity.
CC       {ECO:0000256|ARBA:ARBA00037075}.
CC   -!- SUBUNIT: Interacts with creA, creC and qutD.
CC       {ECO:0000256|ARBA:ARBA00038752}.
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DR   EMBL; GG704911; EAS35264.3; -; Genomic_DNA.
DR   RefSeq; XP_001246847.1; XM_001246846.2.
DR   AlphaFoldDB; J3KHD3; -.
DR   STRING; 246410.J3KHD3; -.
DR   GeneID; 4565582; -.
DR   KEGG; cim:CIMG_00618; -.
DR   VEuPathDB; FungiDB:CIMG_00618; -.
DR   InParanoid; J3KHD3; -.
DR   OMA; CEKKSQR; -.
DR   OrthoDB; 227085at2759; -.
DR   Proteomes; UP000001261; Unassembled WGS sequence.
DR   GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:InterPro.
DR   CDD; cd02663; Peptidase_C19G; 1.
DR   Gene3D; 3.90.70.10; Cysteine proteinases; 1.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR001394; Peptidase_C19_UCH.
DR   InterPro; IPR018200; USP_CS.
DR   InterPro; IPR028889; USP_dom.
DR   PANTHER; PTHR24006:SF944; RE52890P; 1.
DR   PANTHER; PTHR24006; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR   Pfam; PF00443; UCH; 1.
DR   SUPFAM; SSF54001; Cysteine proteinases; 1.
DR   PROSITE; PS00973; USP_2; 1.
DR   PROSITE; PS50235; USP_3; 1.
PE   4: Predicted;
KW   Hydrolase {ECO:0000313|EMBL:EAS35264.3};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001261}.
FT   DOMAIN          55..480
FT                   /note="USP"
FT                   /evidence="ECO:0000259|PROSITE:PS50235"
FT   REGION          1..33
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          108..146
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          243..279
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          489..786
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        115..130
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        243..260
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        261..279
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        545..575
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        583..660
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        728..743
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        757..773
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   786 AA;  88302 MW;  0EC39B59BF3AB8FD CRC64;
     MAILLGKFRG NSASGNGSQS SAPAKRDPVP PPLTPLQKML LDAGPVRDDG SDKFFGMENA
     QFGNTCYCNS ILQCLYYSVP FRESVINYPR RSPPDVLQNA LRNNLRYPDP SVPLDELLKP
     KPPPTTPGKP SNSPLQVQKP EDKNSAEYKK KVALHTLPLL ETTDNSASYG MKESLFTSLK
     DLFEAVIASP ERVGVIRPYH FLEILRREHE MFRTTMHQDA HEFLNLLLNQ VVSNVEDDAV
     LLSDADEQSD NSEETSEGTS EETATDGSVS TLPSNGVKSS RNTRWVHQLF EGTLTSETQC
     LTCETVSQRD EVFLDLSVDL EEHSSVTACL RKFSEEEVLC ERNKFHCDNC GGLQEAERRM
     KIKRLPKILA LHLKRFKYSE DLDRLQKLFH RVTYPYYLRL FNTTDDAEDP DRLYELYAVV
     VHIGGGPYHG HYVAIIKTED RGWLLFDDEM VEPVDKSFVQ NFFGDRPTLT SAYILFYQET
     TDEAMQQELA KENAASARDT PETKDGVAPL VKPNGHPVRP MKLDRSQTAT DAVPTLDSAH
     LSPIKPTPTA PSQLPRSSEE PSSSPPSNGL SRPSLSSLIP KVDLHIKRQR TKNDKEQVKE
     ERDRKAAEKE QAKLDKQKAK RQEFQRKQDE KREQAYIKAA MEESKITKAE EDRRNGVKGD
     KESGFFGLNK IKLRNRSASQ SKLFLRAKEN DVPDLPPLPP PNSLPESATD VSSRVPPSNE
     STDDDKADSA NATAVSLQEQ QPLASHVEAL PPIPTSDTPD SRETPQTPAT PKKTRFNIRK
     RSFNVF
//
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