ID J3LAG3_ORYBR Unreviewed; 721 AA.
AC J3LAG3;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=SWIM-type domain-containing protein {ECO:0000259|PROSITE:PS50966};
GN Name=102720397 {ECO:0000313|EnsemblPlants:OB02G16300.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB02G16300.1};
RN [1] {ECO:0000313|EnsemblPlants:OB02G16300.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB02G16300.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB02G16300.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR RefSeq; XP_006646999.1; XM_006646936.2.
DR AlphaFoldDB; J3LAG3; -.
DR STRING; 4533.J3LAG3; -.
DR EnsemblPlants; OB02G16300.1; OB02G16300.1; OB02G16300.
DR GeneID; 102720397; -.
DR Gramene; OB02G16300.1; OB02G16300.1; OB02G16300.
DR KEGG; obr:102720397; -.
DR eggNOG; ENOG502QR4U; Eukaryota.
DR HOGENOM; CLU_006767_8_1_1; -.
DR OMA; KICASWE; -.
DR OrthoDB; 1085467at2759; -.
DR Proteomes; UP000006038; Chromosome 2.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd06410; PB1_UP2; 1.
DR InterPro; IPR018289; MULE_transposase_dom.
DR InterPro; IPR000270; PB1_dom.
DR InterPro; IPR004332; Transposase_MuDR.
DR InterPro; IPR006564; Znf_PMZ.
DR InterPro; IPR007527; Znf_SWIM.
DR PANTHER; PTHR31973:SF155; OS02G0192200 PROTEIN; 1.
DR PANTHER; PTHR31973; POLYPROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF03108; DBD_Tnp_Mut; 1.
DR Pfam; PF10551; MULE; 1.
DR Pfam; PF00564; PB1; 1.
DR Pfam; PF04434; SWIM; 1.
DR SMART; SM00666; PB1; 1.
DR SMART; SM00575; ZnF_PMZ; 1.
DR SUPFAM; SSF54277; CAD & PB1 domains; 1.
DR PROSITE; PS50966; ZF_SWIM; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00325};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00325}.
FT DOMAIN 593..625
FT /note="SWIM-type"
FT /evidence="ECO:0000259|PROSITE:PS50966"
SQ SEQUENCE 721 AA; 81593 MW; CDFBF2C4662B33F4 CRC64;
MGSKQIVAVL QIGGEFKTDE DGQMSYSGGE AHAMHVKSGW TFKTFKHEIS STLNNLKLDA
YVFKYFLPRN NKTLISISND KDLKRMVEFH AESETTYIYV MKKTDNRVKT SAVVPAAPAD
PGVIATTPDG SKRQKICASW ENAITGAGQV FEGPKEFRDA LHKYAIAHRF HYRFVKNDSS
RVTVECTAEG CSWRLHASKS PAKKDFMIKK VFGSHTCESE TVKSHRLASQ KWVASVIKEK
LRDSPNYRPR DIANDLQREY GLSLNYSQAW RGKSIAQREL YNTHEEACNQ LPWFCQRIVE
TNPGSVATVE ALEDSKFRFF VAFQASIQGF VNGCRPLLFL DVISVKPNKH WKLLAATSVD
GEGDMFPVAL SVVDDESKEN WHWFLKQLKA SLPVSGELTF ISNGKSGLWD EVSLIFPDSY
HGYHVNYFVE EFKAQLDDSW SEEIKDTMVE HVKKAMYSCK VDEFNQSIEL IKVESDKLAE
WLLETKPERW SDAFFKGSRL GQYTCSVSET ILQWIPGRYE LSVVQLVDTI RCNLMEMMYT
RREYSNAWTE VLTPSTNQKI QEEMNKALTH SVVCSTGDDG NSNVFEVCDG SVNVVNIDTW
DCTCRKWHVS GIPCSHAAAV FERTEHNPLD FCAKYFTAEC YRLTYAMSIN PIPDIVVPAP
SADPAQGTAI LYPSPILTRR QVGRPKEKPS DPRIAIKRAV RCSRCKAYGH NKATCKVPIA
A
//
