ID J3LB20_ORYBR Unreviewed; 631 AA.
AC J3LB20;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=102722830 {ECO:0000313|EnsemblPlants:OB02G18370.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB02G18370.1};
RN [1] {ECO:0000313|EnsemblPlants:OB02G18370.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB02G18370.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB02G18370.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR RefSeq; XP_006647083.1; XM_006647020.2.
DR AlphaFoldDB; J3LB20; -.
DR STRING; 4533.J3LB20; -.
DR EnsemblPlants; OB02G18370.1; OB02G18370.1; OB02G18370.
DR GeneID; 102722830; -.
DR Gramene; OB02G18370.1; OB02G18370.1; OB02G18370.
DR KEGG; obr:102722830; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_8_1; -.
DR OMA; HASEAHN; -.
DR OrthoDB; 380385at2759; -.
DR Proteomes; UP000006038; Chromosome 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 10.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF166; PENTACOTRIPEPTIDE-REPEAT REGION OF PRORP DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 4.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 10.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 111..146
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 179..213
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 214..248
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 249..283
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 284..318
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 421..455
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 456..490
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 491..525
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 526..560
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 561..595
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 631 AA; 70569 MW; 9C229422D788309F CRC64;
MPRRLATTYS GRIAAARPSP EGPSLTVTVA PTPPPTPLDP RRHPVCAAAR ILRSQASPTP
LLDLADYLRS LRLTLTAAEA SEVVKALSPD PPLALAFFRF AATSLPGFRH DAFSYNRILA
LLFRARADPA EALRLVADME RDGVAGNIST INLLVGMGGG GAEVERCLEM ASKWGLRLSG
YTYKCIVQAH LRSREVSKGF QVYEEMRRKG YKLDIFAYNM LLDALAKAGM VDQAFQVFED
MKQKHCAPDA YTYTILIRMS GKAGRTSKFL SFFDEMVSKG CALNLIAFNT IIEALGKNKM
VDKVIFVLSK MVQSDCQPNQ FTYSITLDIL ATEGQLHRLN EVLDICSRYM SRSIYSYLVK
SLCKSGHASE AHNIFCRMWN SHEKGDRDAF VSMLEVLCNA EKTLEAIDLL LMMPEKGIAT
DVSMYNKVFS ALGKLKQVSF ISNLFDKMKE NGIIPDIFTY NIMISSYGRV GLVDKASELF
EVMEASGCKP DVVTYNSLIN CLGKNGDLDE AHMLFKEMQE KGYDPDVFTY SILIECFGKS
NKVEMACSLF DEMIAEGCTP NIVTYNILLD CLERRGKTEE AHELYETMKQ QGLIPDSITY
SILERIESRS QRTVRIRKPT RISGWIVSPL R
//
