ID   J3LDS7_ORYBR            Unreviewed;       575 AA.
AC   J3LDS7;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 47.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=102720682 {ECO:0000313|EnsemblPlants:OB02G27940.1};
OS   Oryza brachyantha (malo sina).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB02G27940.1};
RN   [1] {ECO:0000313|EnsemblPlants:OB02G27940.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB02G27940.1};
RX   PubMed=23481403;
RA   Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA   Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA   Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA   An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA   Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA   Chen M.;
RT   "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT   Oryza genome evolution.";
RL   Nat. Commun. 4:1595-1595(2013).
RN   [2] {ECO:0000313|EnsemblPlants:OB02G27940.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2013) to UniProtKB.
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DR   RefSeq; XP_006648732.1; XM_006648669.2.
DR   AlphaFoldDB; J3LDS7; -.
DR   EnsemblPlants; OB02G27940.1; OB02G27940.1; OB02G27940.
DR   GeneID; 102720682; -.
DR   Gramene; OB02G27940.1; OB02G27940.1; OB02G27940.
DR   KEGG; obr:102720682; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_0_2_1; -.
DR   OMA; SCACLGN; -.
DR   OrthoDB; 448009at2759; -.
DR   Proteomes; UP000006038; Chromosome 2.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR045215; PPR_prot_At1g15510.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 7.
DR   PANTHER; PTHR24015:SF1832; OS03G0241800 PROTEIN; 1.
DR   PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 4.
DR   Pfam; PF13041; PPR_2; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 7.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          103..133
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          179..209
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          210..240
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          241..275
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          314..344
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          345..379
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          380..414
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   575 AA;  62823 MW;  CE8AACF3C12FE7D9 CRC64;
     MTVEAVLPLL ERAISAGDVR RLGPAAHALL VKTALTHHTL LSNRLVALYA LLPCPAASLA
     AFADLPHKNA HSYNSLLAAL ARRRGSLPDA LGLLDEMPPA TRNVVSYNTV ISSLARHGRE
     AEALRVFARL VRDRSLGQQQ VAIDRFTVVS AASACAGLGD ARPLREVHGA VVVSGMDVTV
     IMANAIVDAY SKAGRVEDAR KVFDQMTIRD SVSWTSMIAG YCRGSMLDEA VQVFEMMPEQ
     DAIAWTALIS GHEQNGEEEL ALELFERMVG EGVVPTPFAL VSCLSVCAKL GLVARGKEMH
     GFILRRCIGS NPFNIFIHNA LIDMYSKCGN MVAAMATFDR MPERDIISWN SMVTGFSHNG
     QGKQSLAVFE RMLKAEVQPT YVTFLAVLTA CSHAGLVSDG RRILESMQDH GVEPRAEHYA
     AYIDALGRNR RLEEASEFIK GLSSKIGLGT TGSWGALLSA CQVHGNIEIA EEVAEALFQL
     EPENSGRYVM LSNIYSAAGQ WDDARQVRAL MKGKGLRKDQ AYSWIEVQRA KHMFIADDTS
     HCEANEIYEM LDKLFHHMLI AGDPVEDKKG ELALC
//