ID J3LGM7_ORYBR Unreviewed; 262 AA.
AC J3LGM7;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE RecName: Full=Transcription factor CBF/NF-Y/archaeal histone domain-containing protein {ECO:0000259|Pfam:PF00808};
GN Name=102704865 {ECO:0000313|EnsemblPlants:OB02G37940.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB02G37940.1};
RN [1] {ECO:0000313|EnsemblPlants:OB02G37940.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB02G37940.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB02G37940.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- SIMILARITY: Belongs to the NFYB/HAP3 subunit family.
CC {ECO:0000256|ARBA:ARBA00009053}.
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DR RefSeq; XP_006647824.1; XM_006647761.1.
DR AlphaFoldDB; J3LGM7; -.
DR STRING; 4533.J3LGM7; -.
DR EnsemblPlants; OB02G37940.1; OB02G37940.1; OB02G37940.
DR GeneID; 102704865; -.
DR Gramene; OB02G37940.1; OB02G37940.1; OB02G37940.
DR KEGG; obr:102704865; -.
DR eggNOG; KOG0869; Eukaryota.
DR HOGENOM; CLU_066247_3_0_1; -.
DR OMA; AAMLPHH; -.
DR OrthoDB; 1080408at2759; -.
DR Proteomes; UP000006038; Chromosome 2.
DR GO; GO:0016602; C:CCAAT-binding factor complex; IEA:InterPro.
DR GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR InterPro; IPR003958; CBFA_NFYB_domain.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR027113; Transc_fact_NFYB/HAP3.
DR InterPro; IPR003956; Transcrpt_fac_NFYB/HAP3_CS.
DR PANTHER; PTHR11064; CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; 1.
DR PANTHER; PTHR11064:SF197; NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6; 1.
DR Pfam; PF00808; CBFD_NFYB_HMF; 1.
DR PRINTS; PR00615; CCAATSUBUNTA.
DR SUPFAM; SSF47113; Histone-fold; 1.
DR PROSITE; PS00685; NFYB_HAP3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 36..99
FT /note="Transcription factor CBF/NF-Y/archaeal histone"
FT /evidence="ECO:0000259|Pfam:PF00808"
FT REGION 1..25
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 232..262
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 233..254
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 262 AA; 28089 MW; 1790BD90DAB82126 CRC64;
MEAGYPGAAN GAAADGNNGG TQAAAAPAIR EQDRLMPIAN VIRIMRRVLP AHAKISDDAK
ETIQECVSEY ISFITGEANE RCQREQRKTI TAEDVLWAMS RLGFDDYVEP LSVYLHRYRE
FEGESRGVGV GVGVGAARGD HHHHHHHHVH AAGMSPMLKP RAQGSMATHH DMQMHAAMYG
GAVPPPPQPP PHHHAFLMPP HHSQYAPYDM YGGEHGMAAY YGGMYAPGTG GNGGDGSGSS
GSGGAGTPQT VNFDHQHPFG YK
//
