ID J3LWE4_ORYBR Unreviewed; 360 AA.
AC J3LWE4;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=MBD domain-containing protein {ECO:0000259|PROSITE:PS50982};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB04G14690.1};
RN [1] {ECO:0000313|EnsemblPlants:OB04G14690.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB04G14690.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB04G14690.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR AlphaFoldDB; J3LWE4; -.
DR STRING; 4533.J3LWE4; -.
DR EnsemblPlants; OB04G14690.1; OB04G14690.1; OB04G14690.
DR Gramene; OB04G14690.1; OB04G14690.1; OB04G14690.
DR eggNOG; ENOG502QS50; Eukaryota.
DR HOGENOM; CLU_047327_3_0_1; -.
DR OMA; NCAADNQ; -.
DR Proteomes; UP000006038; Chromosome 4.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR InterPro; IPR016177; DNA-bd_dom_sf.
DR InterPro; IPR038945; MBD13-like.
DR InterPro; IPR001739; Methyl_CpG_DNA-bd.
DR PANTHER; PTHR34067; OS04G0193200 PROTEIN; 1.
DR PANTHER; PTHR34067:SF25; OS04G0273900 PROTEIN; 1.
DR SUPFAM; SSF54171; DNA-binding domain; 3.
DR PROSITE; PS50982; MBD; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 29..99
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT DOMAIN 169..248
FT /note="MBD"
FT /evidence="ECO:0000259|PROSITE:PS50982"
FT REGION 260..360
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 287..302
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 323..360
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 360 AA; 41786 MW; F972435F238EE35F CRC64;
MTESSSTLIL DYEKVNFSKK ETEKRQQEAE GLEERPGWLP DGWIMEINLG GDGTIYRYYT
SPLSGLTFTM KSEVLEYLFS GMDERFLESK NYAAHNKLVM THEWLPNDWL IEIRAGGENT
DKMFKFYVYP PAGVRLFSKE DVLTYINKCK ITPFDTNGQC DTRTKDNILA NVEFNPHSLP
KGWVKELVFR KTKDAVRKDP YYTDPVSNYS FRTRRSAMLF VQTGKVPRRA FIQRTSVHDL
YSFEKSADLH ESLRKRLYFT PTTNRRPRGS LKSKKSSLRE EILSDEESSY SSEDDDFFDD
SSDSSNEIGR NKVQVAKATR KPRKVMSLND IKRPVGRPRK QPNETKGKQC DAEIKRESES
//
