GenomeNet

Database: UniProt
Entry: J3LWW9_ORYBR
LinkDB: J3LWW9_ORYBR
Original site: J3LWW9_ORYBR 
ID   J3LWW9_ORYBR            Unreviewed;       547 AA.
AC   J3LWW9;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   24-JAN-2024, entry version 44.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Oryza brachyantha (malo sina).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB04G16440.1};
RN   [1] {ECO:0000313|EnsemblPlants:OB04G16440.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB04G16440.1};
RX   PubMed=23481403;
RA   Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA   Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA   Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA   An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA   Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA   Chen M.;
RT   "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT   Oryza genome evolution.";
RL   Nat. Commun. 4:1595-1595(2013).
RN   [2] {ECO:0000313|EnsemblPlants:OB04G16440.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2013) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   AlphaFoldDB; J3LWW9; -.
DR   EnsemblPlants; OB04G16440.1; OB04G16440.1; OB04G16440.
DR   Gramene; OB04G16440.1; OB04G16440.1; OB04G16440.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_0_1; -.
DR   OMA; CDRYHEM; -.
DR   Proteomes; UP000006038; Chromosome 4.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 11.
DR   PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR   PANTHER; PTHR47939:SF3; OS03G0201400 PROTEIN; 1.
DR   Pfam; PF01535; PPR; 2.
DR   Pfam; PF12854; PPR_1; 2.
DR   Pfam; PF13041; PPR_2; 4.
DR   SUPFAM; SSF81901; HCP-like; 1.
DR   PROSITE; PS51375; PPR; 11.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          19..53
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          54..88
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          89..123
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          124..158
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          159..193
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          194..228
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          265..299
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          300..334
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          335..369
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          405..439
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          440..474
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   547 AA;  61153 MW;  822A6C9085E4E0BC CRC64;
     MDKAEMVLEQ MVDAGIQPNN MTYNSLIHGY STSGMWKESV RVLKGMSSSG LIPNVNNCNT
     FMAALCKHGR IKEAKDIFDS MVLKGPKPDV ISYSTLLQGY AAEGSFTDVH NTFKLMVTNG
     IMPNRYVFNT LLDVYARYGM MDKVLLILER MSKQGFNPDV VSFGIVISAF CRMGRLDDAL
     NKFSHMIDIG IAPDMAIYHI LLQGHCNHGD LVKAKELTSD MINKGFPLPP VIFFNSIIND
     LCSTGRVAEG KDIMDLITHT GQKPDVIIFN SLIDGYCLVG KMEEAFELLD VMASVGVEPN
     SYILDTLLNG YCKNGRIEDA LTLFKDMLHK RVTPTCWSYN TILHGLFQAG WTVAAKKIFH
     EMIESGMTVS IHTYGIVLSG LSRNNCTDEV IMLLEKLFAM NVKFDIIIFN IIISSMFKVG
     RRKEAKELFA AMSTYGLVPS IHTYCVMIIN LIEEKSFEEV DSVFSSMEDT GIPPNSPLLN
     KIVRILLEEG EIAQARNYIS KIDEKGISLE ASTTSLLISL FSEKGKYREY LKWLPAKYQV
     FEGVGIS
//
DBGET integrated database retrieval system