ID J3M412_ORYBR Unreviewed; 615 AA.
AC J3M412;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE RecName: Full=DRBM domain-containing protein {ECO:0000259|PROSITE:PS50137};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB05G13360.1};
RN [1] {ECO:0000313|EnsemblPlants:OB05G13360.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB05G13360.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB05G13360.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- FUNCTION: Binds double-stranded RNA. {ECO:0000256|ARBA:ARBA00037597}.
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DR AlphaFoldDB; J3M412; -.
DR EnsemblPlants; OB05G13360.1; OB05G13360.1; OB05G13360.
DR Gramene; OB05G13360.1; OB05G13360.1; OB05G13360.
DR eggNOG; ENOG502QTBA; Eukaryota.
DR HOGENOM; CLU_017946_1_0_1; -.
DR OMA; QKPHFPM; -.
DR Proteomes; UP000006038; Chromosome 5.
DR GO; GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
DR CDD; cd19907; DSRM_AtDRB-like_rpt1; 1.
DR CDD; cd19908; DSRM_AtDRB-like_rpt2; 1.
DR Gene3D; 3.30.160.20; -; 2.
DR InterPro; IPR044450; AtDRB-like_DSRM_1.
DR InterPro; IPR044451; AtDRB-like_DSRM_2.
DR InterPro; IPR014720; dsRBD_dom.
DR PANTHER; PTHR46031:SF2; DOUBLE-STRANDED RNA-BINDING PROTEIN 2; 1.
DR PANTHER; PTHR46031; DOUBLE-STRANDED RNA-BINDING PROTEIN 6; 1.
DR Pfam; PF00035; dsrm; 2.
DR SMART; SM00358; DSRM; 2.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 2.
DR PROSITE; PS50137; DS_RBD; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00266}.
FT DOMAIN 31..100
FT /note="DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50137"
FT DOMAIN 117..185
FT /note="DRBM"
FT /evidence="ECO:0000259|PROSITE:PS50137"
FT REGION 185..204
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 218..249
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 399..536
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 572..615
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 410..432
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 460..495
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 615 AA; 66851 MW; 61BAB1334B5DA9F7 CRC64;
MAVVVGSAAL RCRNWSPVLA DTRLFAPEFG MYKNQLQELA QRSCFNLPSY ACIREGPDHA
PRFKATVNFN GETFESPTFC STLRLAEHAA AEVALNELSR RGPSSSLAAK VLDETGIYKN
LLQETAHRAG LKLPVYTTIR SGPGHTPVFT CTVELAGMTF TGNPGKTKKQ AQKNAAMAAW
SELKKLPRVG DPSSSSCPPD HDDDDQEQII VARTLASLNQ TNGGKTPHQK EKQQSSNRLP
SRRPSYPKSN ASLHRLHLQK HTYPSVPPEQ AMYHMWHQVH TTQQKPHFPM VPTMGSTGFP
PPPTMLHLYP APRGQFTMPA SQDGLGLLPA PVLPRYFSPY PASYVPRSQL QVNVHKVHEK
RLVGAGAVEL PDAAVFSQYT SPDFSGPSEN VGLDIRKEEC TESCPPSEEE TKAHTASSST
MHSPSQKLES NQEKEIMGGV RLESKKSAEQ PPSPPSKVNP VLHGTGQQHH YSSVRHSDPV
HRNSPQISVP TSPSSVHEGG DPAHRSSPQI SAGTSPECWS PRAQAPPRFG TRIPSPSLLY
QQRPPWLAAS VTIRTAVPVC SARPNVVNSS AGAAHAQPAV QIFSAPPRQE PEAHKNTRET
SGAAPASSEL SKLHI
//
