ID   J3M5P5_ORYBR            Unreviewed;       860 AA.
AC   J3M5P5;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 37.
DE   RecName: Full=Pre-rRNA-processing protein RIX1 N-terminal domain-containing protein {ECO:0000259|Pfam:PF08167};
OS   Oryza brachyantha (malo sina).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB05G19190.1};
RN   [1] {ECO:0000313|EnsemblPlants:OB05G19190.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB05G19190.1};
RX   PubMed=23481403;
RA   Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA   Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA   Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA   An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA   Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA   Chen M.;
RT   "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT   Oryza genome evolution.";
RL   Nat. Commun. 4:1595-1595(2013).
RN   [2] {ECO:0000313|EnsemblPlants:OB05G19190.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2013) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the RIX1/PELP1 family.
CC       {ECO:0000256|ARBA:ARBA00010511}.
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DR   AlphaFoldDB; J3M5P5; -.
DR   STRING; 4533.J3M5P5; -.
DR   EnsemblPlants; OB05G19190.1; OB05G19190.1; OB05G19190.
DR   Gramene; OB05G19190.1; OB05G19190.1; OB05G19190.
DR   eggNOG; ENOG502QR0U; Eukaryota.
DR   HOGENOM; CLU_015612_1_1_1; -.
DR   OMA; DSCGQDM; -.
DR   Proteomes; UP000006038; Chromosome 5.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR012583; RIX1_N.
DR   PANTHER; PTHR34105; PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1; 1.
DR   PANTHER; PTHR34105:SF1; PROLINE-, GLUTAMIC ACID- AND LEUCINE-RICH PROTEIN 1; 1.
DR   Pfam; PF08167; RIX1; 1.
DR   SUPFAM; SSF48371; ARM repeat; 1.
PE   3: Inferred from homology;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006038}.
FT   DOMAIN          36..221
FT                   /note="Pre-rRNA-processing protein RIX1 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF08167"
FT   REGION          467..522
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          688..860
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        732..800
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        845..860
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   860 AA;  93147 MW;  303F4BB9FA53AE09 CRC64;
     MAGAGGFLAG VNDPWLKLRL GGGGGGRRPK PGGALPPAEL ATVLDAVRTH GLLTERLPGT
     HDPKLAEAWR AAVDAWVERI GELVQSDMPC SRWLGICFLG LTFQECSNER FAESYSNWFE
     KILSNLQGPS SEQLVIIVSC TSMSDLFVRM ARCLNLKKEA SSFAGRVVEP VLLLLNGNGP
     VANEAVDLLR TVIKLYPSSV NRHYNKVESS IATNVMSSEV NVKLKEKFVR ALASLPSVRV
     SEESWSLMIQ KILIVVNNLL NDAFFGLEEE KKGHEILMLL VPPGNDPPPL LGDQTKWSGG
     NVHVTKKFRV YTVPTISALI HCCCVMLTSY HPVQVNVPVR ALIALTWRVL SVDGSLHRKL
     FPSTTSLHQE LICFELPSLH STFLDLLSST IKGMRSQLLP HAANIVRLIT KYFEIARLPT
     TRTKAYIIVQ QLLTSMGVGI SIHLLDAIVS NSVADLDDSC GQDMTSLSTK PTIVTNESSS
     KSYSKKRKQE TDAQNLHVSG SEKTAISPKK RKNSSLSTTP ETTADVRMLT PLSVKLAALE
     TLEILLNVGG SLRTDHWRAD VDLLLINIAR SACDTGRRYE HKLPSTVGET SIADFQLASL
     KALLASFLSS HTRPPYLAQG IELFRRGKLE IGTKLAEFCS HALLALDVLT HPRALPLECV
     VPSGPGLTFG APEKATFGTE KYKFSLSGNQ SQALEDDDPY DDWLTPTTVG EPTGSPAKDN
     PVGKERATEM SQGERQSTPV GEHQQTDTAM SPADIQDVPT SGKSDTEMAD VATTETANPE
     TKDGTFSSNA ASTPVRTVLP DLNQQVAAPA FEEGHADPVD HLQNIPSAVD APLTGGKSDD
     SDVESEDSMP GIVDGDPDSD
//