ID J3M613_ORYBR Unreviewed; 579 AA.
AC J3M613;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=NADH:ubiquinone reductase (non-electrogenic) {ECO:0000256|ARBA:ARBA00012637};
DE EC=1.6.5.9 {ECO:0000256|ARBA:ARBA00012637};
GN Name=102711886 {ECO:0000313|EnsemblPlants:OB05G20370.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB05G20370.1};
RN [1] {ECO:0000313|EnsemblPlants:OB05G20370.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB05G20370.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB05G20370.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a quinone + H(+) + NADH = a quinol + NAD(+);
CC Xref=Rhea:RHEA:46160, ChEBI:CHEBI:15378, ChEBI:CHEBI:24646,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57945, ChEBI:CHEBI:132124; EC=1.6.5.9;
CC Evidence={ECO:0000256|ARBA:ARBA00000864};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a ubiquinone + H(+) + NADH = a ubiquinol + NAD(+);
CC Xref=Rhea:RHEA:23152, Rhea:RHEA-COMP:9565, Rhea:RHEA-COMP:9566,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:16389, ChEBI:CHEBI:17976,
CC ChEBI:CHEBI:57540, ChEBI:CHEBI:57945;
CC Evidence={ECO:0000256|ARBA:ARBA00000891};
CC -!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
CC {ECO:0000256|ARBA:ARBA00004137}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004137}; Intermembrane side
CC {ECO:0000256|ARBA:ARBA00004137}. Peroxisome
CC {ECO:0000256|ARBA:ARBA00004275}.
CC -!- SIMILARITY: Belongs to the NADH dehydrogenase family.
CC {ECO:0000256|ARBA:ARBA00005272}.
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DR RefSeq; XP_006654264.1; XM_006654201.2.
DR AlphaFoldDB; J3M613; -.
DR STRING; 4533.J3M613; -.
DR EnsemblPlants; OB05G20370.1; OB05G20370.1; OB05G20370.
DR GeneID; 102711886; -.
DR Gramene; OB05G20370.1; OB05G20370.1; OB05G20370.
DR KEGG; obr:102711886; -.
DR eggNOG; KOG2495; Eukaryota.
DR HOGENOM; CLU_021377_1_0_1; -.
DR OMA; WIKLAFF; -.
DR OrthoDB; 48029at2759; -.
DR Proteomes; UP000006038; Chromosome 5.
DR GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005777; C:peroxisome; IEA:UniProtKB-SubCell.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0003954; F:NADH dehydrogenase activity; IEA:InterPro.
DR GO; GO:0006116; P:NADH oxidation; IEA:InterPro.
DR Gene3D; 3.50.50.100; -; 2.
DR InterPro; IPR011992; EF-hand-dom_pair.
DR InterPro; IPR002048; EF_hand_dom.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR InterPro; IPR023753; FAD/NAD-binding_dom.
DR InterPro; IPR045024; NDH-2.
DR PANTHER; PTHR43706; NADH DEHYDROGENASE; 1.
DR PANTHER; PTHR43706:SF23; NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC); 1.
DR Pfam; PF07992; Pyr_redox_2; 1.
DR PRINTS; PR00368; FADPNR.
DR PRINTS; PR00469; PNDRDTASEII.
DR SUPFAM; SSF47473; EF-hand; 1.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 2.
DR PROSITE; PS50222; EF_HAND_2; 1.
PE 3: Inferred from homology;
KW FAD {ECO:0000256|ARBA:ARBA00022827};
KW Flavoprotein {ECO:0000256|ARBA:ARBA00022630};
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Peroxisome {ECO:0000256|ARBA:ARBA00023140};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT DOMAIN 377..412
FT /note="EF-hand"
FT /evidence="ECO:0000259|PROSITE:PS50222"
SQ SEQUENCE 579 AA; 65055 MW; F864F01007BEBC6B CRC64;
MSASGGLSLV RRAAEAVRRT PRWQKRLVVL TVGVGSLTYA CQDNQVLQIN DGTGKKKVVI
VGTGWAGATF LRNIDTSLYD VHVVSPRNYF TFTPLLPSVT CGTVEARSIV EPIRNIVRKR
GGAFRFWEAE CYKIDPTNKK IHCRSDNGTN VDGSGEFVVD YDYLVVAVGA RPNTFNTPGV
VENCHFLKEV EDAQKIRKSV LKCFERASLP NLTEEERKKN LHFVVIGGGP TGVEFAAELH
DFVNEDLAKL YPDVKKYVNI SVIEAGDHIL TMFDKRITQF AEDKFKRTGI DLKTNFKVVK
VSDKAITMTN SATGEIAVPY GMAVWSTGIG TRPIIMDFMK QVGQANRRVL ATDEWLRVHG
CDDVYAVGDC ATITQRKVME DVAAIFRVAD KDNSGTLTIK KIKNVLGDIY VRYPQVELYL
KTNQMKDFHD LLKGSDGNPI KESKELDIEE FKKALARVDS QVKMLPATAQ VASQEGTYLA
NCFNRMKYCE ENPEGPLRIR GTGRHRFKPF RYRHLGQFAP LGGEQTAAQL PGDWIHVGHS
TQWLWYSVYA SKQFSWRTRM LVVSDWARSF IHGRDSSSL
//
