ID   J3MD89_ORYBR            Unreviewed;      1589 AA.
AC   J3MD89;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 43.
DE   RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE            EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
OS   Oryza brachyantha (malo sina).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB06G19830.1};
RN   [1] {ECO:0000313|EnsemblPlants:OB06G19830.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB06G19830.1};
RX   PubMed=23481403;
RA   Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA   Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA   Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA   An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA   Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA   Chen M.;
RT   "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT   Oryza genome evolution.";
RL   Nat. Commun. 4:1595-1595(2013).
RN   [2] {ECO:0000313|EnsemblPlants:OB06G19830.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2013) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC         [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC         cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC         EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC   -!- PATHWAY: Protein modification; protein ubiquitination.
CC       {ECO:0000256|ARBA:ARBA00004906}.
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DR   STRING; 4533.J3MD89; -.
DR   EnsemblPlants; OB06G19830.1; OB06G19830.1; OB06G19830.
DR   Gramene; OB06G19830.1; OB06G19830.1; OB06G19830.
DR   eggNOG; KOG0167; Eukaryota.
DR   HOGENOM; CLU_244784_0_0_1; -.
DR   UniPathway; UPA00143; -.
DR   Proteomes; UP000006038; Chromosome 6.
DR   GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR   GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR   Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR000225; Armadillo.
DR   InterPro; IPR003613; Ubox_domain.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR45958; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR   PANTHER; PTHR45958:SF4; U-BOX DOMAIN-CONTAINING PROTEIN 42-RELATED; 1.
DR   Pfam; PF04564; U-box; 1.
DR   SMART; SM00185; ARM; 5.
DR   SMART; SM00504; Ubox; 1.
DR   SUPFAM; SSF48371; ARM repeat; 1.
DR   SUPFAM; SSF57850; RING/U-box; 1.
DR   PROSITE; PS51698; U_BOX; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000006038}.
FT   DOMAIN          212..291
FT                   /note="U-box"
FT                   /evidence="ECO:0000259|PROSITE:PS51698"
SQ   SEQUENCE   1589 AA;  175917 MW;  A391D4BBA5B4C1FD CRC64;
     MAVRSGAQAR KASLVESIQA AISELMPPEA AADAEQENFM DVGSHLYHAP LATMDLQRAQ
     NSTIHAMEYL AANVDLAKDL IMRCSTVARK LKNDDLLSMT EDLDSVIKNI GHELSRIPAS
     TFGSTRFAET RADANLQIAG NRPRYCDQNS CDGYSEADMS IITANSRPRR RTLHNSDMPR
     LVDFLQGMYH ESHDIGAHSF NSLPEVAEYV EPLYDSFFCP LTNKVMVDPV TTESGVTFDR
     KAIEEYFEKF TDGSEPVICP VTKMSMQSKT LRSNVPLKST IAEWIMRNES TRVRIARTAL
     SMASTEAMVL EAIQELKLLA KLRRKNREQM HKIGITKFLP RLLEHKDGLI RCDSLDLLCL
     LVGDETGKEI IANTRAITRT IKLLSSSSPD ERHAAISFLL ELSKSELLLE NIGSTAGSIL
     MLTTMKFNDS DDPVAAEKAG EVLKNLEKCP KNIKYMAESG YLDPLQRHLV EGSEDVQMEM
     VSYLGELVQK QEMTINIAGS ASEILIKMVH SGNTMIRKAA LDVLVQISSD GPNSKTLVDA
     GAVPVMVEEL FIRKIDDEPM GSKTEAAAVL ANIVESGLDP DTIVVNKEGH VITSKYSVYN
     FTHMLKCSMP DDLNLSIIRV LLALTALPKP LMTVVSVMKE QDISLTVIEF MGSQTEALGI
     GATRLLIALS PQMGHTIAEK LCKAPGQPGR LVKSIGQPGR VTERHAVSAT LLARLPYQNI
     TLNMALLEQG AVATLLAKIE EMQRGEMARA SRHARPYMEG LVGALVRMTT TLYDPDVLLV
     AMDHNFTAVL TDLLVRSAGS DEVQRLAAVG LENLSHQSVN LSQPLSEERR PKKKKNILXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
     XXXXXXXXXX XXXXXXXXXS RRCFWAVERF LAHGGERCVR DVTADRALPN ALVSAFHKGD
     AATKQVAESV LRSLHRMPDY SATYVSVEL
//