ID J3MEK1_ORYBR Unreviewed; 666 AA.
AC J3MEK1;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB06G24450.1};
RN [1] {ECO:0000313|EnsemblPlants:OB06G24450.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB06G24450.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB06G24450.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- SIMILARITY: Belongs to the eukaryotic initiation factor 4G family.
CC {ECO:0000256|ARBA:ARBA00005775}.
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DR AlphaFoldDB; J3MEK1; -.
DR STRING; 4533.J3MEK1; -.
DR EnsemblPlants; OB06G24450.1; OB06G24450.1; OB06G24450.
DR Gramene; OB06G24450.1; OB06G24450.1; OB06G24450.
DR eggNOG; KOG0401; Eukaryota.
DR eggNOG; KOG1677; Eukaryota.
DR HOGENOM; CLU_439029_0_0_1; -.
DR OMA; KDTHCEQ; -.
DR Proteomes; UP000006038; Chromosome 6.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003743; F:translation initiation factor activity; IEA:InterPro.
DR Gene3D; 1.25.40.180; -; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR045208; IF4G.
DR InterPro; IPR003890; MIF4G-like_typ-3.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR23253; EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA; 1.
DR PANTHER; PTHR23253:SF85; EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4G-2; 1.
DR Pfam; PF02854; MIF4G; 1.
DR Pfam; PF00642; zf-CCCH; 3.
DR SMART; SM00543; MIF4G; 1.
DR SMART; SM00356; ZnF_C3H1; 3.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 47..75
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 85..113
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 150..178
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 47..75
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 85..113
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 150..178
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 320..343
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 35..49
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 666 AA; 74935 MW; CA5772158EF0F8B3 CRC64;
MTTTTAASSD EPRRRAPPSS PGERPSTASC QVCRRDDPPE AEEHPRRPGE PDCSYYVKFG
SCKFGMSCVY NHPAPPPPSK HHPLRPGEPD CLHYLMFGRC KYGMDCKFNH PPGLTPLQQY
FSGRTCQCHH NEGKSEAEHV KLNNLGLPLR PGAGLCSYYM NRGICKVGTN CKFHHPDQEP
DHVKLVPSRH DNQVTFQANI YSVLDLEESN ELCEDVKQPA ERICYTRDQL IQLSETVDVP
TDHILELIHH INVELGGEDE SRVPNETNHV QIPSYKRFDK IDNRDWRSRS IQTPVVASQD
KFWDNIHEGN EAYALGWKQE QSNKHDQLST HSDSKEQVGP TSALSNVEVP WSIRRGNPTE
KHGVQETVKG VLNILTPENF DHLKDQLIVA GIARADILED IINLILQKVV AEPNFCPMYA
QLFSYINKHL TAFPPDGEQI TFKQALSKKF EEAFEIARTA RADINKMTGP DQEMERRDKE
RLLKLQTLGN IRLIRDLLKQ KMVTDKIAYH IVKAVMDSGK FVFEPIENID LLYIIFEGIL
GSVSAGTEAD IAVNAIVTSK KCSIIANDVE ITDKGIDRPN EEATLRKSSN EIAENSMDFA
HAVCSHLGNE NNKPNNSETS VRISHLGNEN DKSTNSETSV RFNPVGCGIS EIMELVVRCW
GSGRDQ
//
