ID J3MFP9_ORYBR Unreviewed; 994 AA.
AC J3MFP9;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE RecName: Full=Tr-type G domain-containing protein {ECO:0000259|PROSITE:PS51722};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB06G28430.1};
RN [1] {ECO:0000313|EnsemblPlants:OB06G28430.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB06G28430.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB06G28430.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (FEB-2015) to UniProtKB.
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DR STRING; 4533.J3MFP9; -.
DR EnsemblPlants; OB06G28430.1; OB06G28430.1; OB06G28430.
DR Gramene; OB06G28430.1; OB06G28430.1; OB06G28430.
DR eggNOG; KOG0468; Eukaryota.
DR HOGENOM; CLU_002794_11_2_1; -.
DR OMA; YIFRPIR; -.
DR Proteomes; UP000006038; Chromosome 6.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR GO; GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
DR CDD; cd04098; eEF2_C_snRNP; 1.
DR CDD; cd04090; EF2_II_snRNP; 1.
DR CDD; cd01683; EF2_IV_snRNP; 1.
DR CDD; cd16264; snRNP_III; 1.
DR CDD; cd04167; Snu114p; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.30.70.240; -; 1.
DR Gene3D; 3.30.70.870; Elongation Factor G (Translational Gtpase), domain 3; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 2.40.30.10; Translation factors; 1.
DR Gene3D; 3.90.1430.10; Yeast translation eEF2 (G' domain); 1.
DR InterPro; IPR035647; EFG_III/V.
DR InterPro; IPR000640; EFG_V-like.
DR InterPro; IPR004161; EFTu-like_2.
DR InterPro; IPR031950; EFTUD2_N.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR005225; Small_GTP-bd_dom.
DR InterPro; IPR044121; Snu114_GTP-bd.
DR InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR005517; Transl_elong_EFG/EF2_IV.
DR InterPro; IPR035655; U5-116kDa_C.
DR NCBIfam; TIGR00231; small_GTP; 1.
DR PANTHER; PTHR42908:SF6; 116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT; 1.
DR PANTHER; PTHR42908; TRANSLATION ELONGATION FACTOR-RELATED; 1.
DR Pfam; PF00679; EFG_C; 1.
DR Pfam; PF03764; EFG_IV; 1.
DR Pfam; PF16004; EFTUD2; 1.
DR Pfam; PF00009; GTP_EFTU; 1.
DR Pfam; PF03144; GTP_EFTU_D2; 1.
DR PRINTS; PR00315; ELONGATNFCT.
DR SMART; SM00838; EFG_C; 1.
DR SMART; SM00889; EFG_IV; 1.
DR SUPFAM; SSF54980; EF-G C-terminal domain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
DR PROSITE; PS51722; G_TR_2; 1.
PE 4: Predicted;
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038}.
FT DOMAIN 143..369
FT /note="Tr-type G"
FT /evidence="ECO:0000259|PROSITE:PS51722"
FT REGION 1..70
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 994 AA; 110059 MW; AA0CAC37E138DF7D CRC64;
MXPSLYDEFG NYIGPELADS DADDSDADAS PSPSPSRSPS PAARSPSGSP SRPAALMDVD
DEDGADPSQG AVVLAEDKKY YPTAEEVFGP GVEALVMDED EQSLEQPIVA PPRVVRFEVG
TRAEATSTYA TTDFLLGLAA NPALVRNVAL VGHLQHGKTV FMDMLVEQTH EVDTFDSEGE
RHVRFTDTRV DEQERRVSIK AVPMSLVLEA GNGKSYLCNI MDTPGHVNFS DEMTAALRIA
DGAVLVVDAA EGVMVNTERA IRHATQERLP IVVVINKVDR LITELKLPPN DAYFKLRHTL
EAINDLISSC STTVGGTQLV DPAAGNVCFA SGSAGWSFTL QSFAHLYLKI HGIQFDHEKF
ASRLWGDLYY HPDTRTFKKK PPKEGANRSF VEFVLEPLYK IYSQVVGESK GKVEATLSEL
GVTLSNAAYK LNVRPLLRLA CRSIFGTSTG FTDMLVKHIP SVKDAAPRKI EHIYTGPQDS
AIVDAMKKCD PHAPLMVNVT KLYPKSDCSV FDAFGRVYSG TIQTGQTVRV LGEGYSPDDE
EDMTVKEVTK LWVYQARYRV PISKAPAGSW VLIEGVDASI MKTATICPMK MDEDVYIFRP
LRFNTLPVVK IAAEPLNPSE LPKMVEGLRK ISKSYPLAVT KVEESGEHTI LGTGELYLDS
IMKDLRELYS EVEVKVADPV VTFCETVVDT SSMKCFAETP NKRNKITMVA EPLEKGLAED
IENGLVSLDS RQKQITDFFR QRYQWDVLAA RSIWAFGPEK QGPNILLDDT LSVEVDKNLL
NAVKDSIVQG FQWGAREGPL CDEPIRNVKF KILNANIAPE PLHRGGGQII PTARRVVYSA
FLMANPRLME PVYYVEIQTP IDCVSAIYTV LSRRRGHVTA DVPKPGTPIY VVKAFLPVIE
SFGFETDLRY HTQGQAFCVS VFDHWAIVPG DPLDKSIVLR PLEPAPIQHL AREFMVKTRR
RKGMSEDVSI NKFFDEAMMN ELAQQAADLH LQMM
//
