ID J3ML49_ORYBR Unreviewed; 515 AA.
AC J3ML49;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB07G21310.1};
RN [1] {ECO:0000313|EnsemblPlants:OB07G21310.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB07G21310.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB07G21310.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR AlphaFoldDB; J3ML49; -.
DR STRING; 4533.J3ML49; -.
DR EnsemblPlants; OB07G21310.1; OB07G21310.1; OB07G21310.
DR Gramene; OB07G21310.1; OB07G21310.1; OB07G21310.
DR eggNOG; KOG0828; Eukaryota.
DR HOGENOM; CLU_038877_0_0_1; -.
DR OMA; HYVQGSV; -.
DR Proteomes; UP000006038; Chromosome 7.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd23117; RING-H2_TUL1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR22763; RING ZINC FINGER PROTEIN; 1.
DR PANTHER; PTHR22763:SF165; RING-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT TRANSMEM 217..236
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 248..271
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 283..304
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 333..362
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 382..401
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 413..434
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 465..509
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 515 AA; 59150 MW; A448F7F1E945C7F8 CRC64;
MHAFFKRDEN EISPYSWNIT GTYKGSWSFA GSTNGSSRFL EFTKLKGDSV LELLSTPTKI
SGVHYVQGSV TFHDVIDNAH DRGVAQIRLE GVYIWPFRQL RMVANSGADG EPLQEEDYFL
SNPYHLLRIF SSQVFQETSE EKNRRKNSLT YDMEKHCSVE IAAKVVRVSS NLNEGEHEKY
RLEGLMESPA VDDDGECFSP ILLNATSLNV EVYYNKAVNY TLMVTFISFL QVLLLIRQME
HSNTQSGAAK VSILMIGQQA IMDAYLCLLH LTAGILVESL FNAFATAAFF KFVVFSIFEM
RYLLAIWKAS RPLSSGEGWE VMRRELSVLY SRFYGILLGG ILLMYELHNF LRPLLFLMYS
FWVPQIVTNV IRDTRKPLHP QYILGMTITR LAIPLYIFGC PNNFMRIEPD KKWCIAVTIF
MGIQAAVLLL QHYFGSRCFI PHQILPEKYC YHRKVEDNSN QPVDCVICMT TIDLTQRTSE
YMVAPCEHIF HSGCLQRWMD IKMECPTCRR SLPPA
//