ID J3MMN4_ORYBR Unreviewed; 446 AA.
AC J3MMN4;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 43.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN Name=102718758 {ECO:0000313|EnsemblPlants:OB07G26660.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB07G26660.1};
RN [1] {ECO:0000313|EnsemblPlants:OB07G26660.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB07G26660.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB07G26660.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR RefSeq; XP_006658771.1; XM_006658708.2.
DR AlphaFoldDB; J3MMN4; -.
DR STRING; 4533.J3MMN4; -.
DR EnsemblPlants; OB07G26660.1; OB07G26660.1; OB07G26660.
DR GeneID; 102718758; -.
DR Gramene; OB07G26660.1; OB07G26660.1; OB07G26660.
DR KEGG; obr:102718758; -.
DR eggNOG; KOG1721; Eukaryota.
DR HOGENOM; CLU_029000_2_0_1; -.
DR OMA; RRTRYMG; -.
DR OrthoDB; 4569288at2759; -.
DR Proteomes; UP000006038; Chromosome 7.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR46869; C2H2-LIKE ZINC FINGER PROTEIN; 1.
DR PANTHER; PTHR46869:SF6; C2H2-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13912; zf-C2H2_6; 3.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 16..38
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 109..136
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 311..338
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 130..195
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 287..306
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 347..394
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 142..156
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 289..304
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 352..394
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 446 AA; 46472 MW; 0F590FE18DBB4BFD CRC64;
MDAVAVLSGG AGSGMRRCRV CGKGFSCGRS LGGHMRSHVT FGDAVAEADG GGGGGGGGGD
GDGEVNGGRC SNGVVGYGLR ENPKKTRRLS EFDEEDEVVE EGGDGGELMA CRECGKLFST
WRSLVGHMRR HASGGRDRGD EDDEFDGPEA EEEEEVMVAP AAVTVIAAPP RRRRRSMRVA
APAPAPPPVP GGGVEKEQED VALCLLMLSR DTGMWRSPVK AVEPFEMVEQ KKKKATAKQP
PPIPRNGYGY NSDEDSALLQ CGDAKTNNTG RGGGDVAKCR KRRASYYAPN SISPKQQQQQ
RAAAPAKRTR YECPGCGKVF SSYQALGGHR ASHKRINTSC SAPKAAAATA TAPEPSSETY
ASLGDGTLSP SASPDSVATA IGNSKTNKSA AEKFGGQQVT GACSDDGELY ASSSGNVELE
LEQHSPPAAT AFLDLNFPPA SSSEVA
//
