ID J3MNQ9_ORYBR Unreviewed; 1327 AA.
AC J3MNQ9;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=Condensin-1 complex subunit CAP-D2 {ECO:0000256|PIRNR:PIRNR017127};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB07G30410.1};
RN [1] {ECO:0000313|EnsemblPlants:OB07G30410.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB07G30410.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB07G30410.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- FUNCTION: Regulatory subunit of the condensin complex, a complex
CC required for conversion of interphase chromatin into mitotic-like
CC condense chromosomes. The condensin complex probably introduces
CC positive supercoils into relaxed DNA in the presence of type I
CC topoisomerases and converts nicked DNA into positive knotted forms in
CC the presence of type II topoisomerases.
CC {ECO:0000256|PIRNR:PIRNR017127}.
CC -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the CND1 (condensin subunit 1) family.
CC {ECO:0000256|ARBA:ARBA00009606, ECO:0000256|PIRNR:PIRNR017127}.
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DR STRING; 4533.J3MNQ9; -.
DR EnsemblPlants; OB07G30410.1; OB07G30410.1; OB07G30410.
DR Gramene; OB07G30410.1; OB07G30410.1; OB07G30410.
DR eggNOG; KOG0414; Eukaryota.
DR HOGENOM; CLU_001867_2_1_1; -.
DR OMA; CPLEKLW; -.
DR Proteomes; UP000006038; Chromosome 7.
DR GO; GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR GO; GO:0007076; P:mitotic chromosome condensation; IEA:InterPro.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 2.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR026971; CND1/NCAPD3.
DR InterPro; IPR032682; Cnd1_C.
DR InterPro; IPR026003; Cohesin_HEAT.
DR InterPro; IPR007673; Condensin_cplx_su1.
DR InterPro; IPR024324; Condensin_cplx_su1_N.
DR PANTHER; PTHR14222; CONDENSIN; 1.
DR PANTHER; PTHR14222:SF2; CONDENSIN COMPLEX SUBUNIT 1; 1.
DR Pfam; PF12717; Cnd1; 1.
DR Pfam; PF12922; Cnd1_N; 1.
DR Pfam; PF12765; Cohesin_HEAT; 1.
DR PIRSF; PIRSF017127; Condensin_D2; 2.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Cell cycle {ECO:0000256|ARBA:ARBA00023306, ECO:0000256|PIRNR:PIRNR017127};
KW Cell division {ECO:0000256|ARBA:ARBA00022618,
KW ECO:0000256|PIRNR:PIRNR017127}; Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW DNA condensation {ECO:0000256|ARBA:ARBA00023067,
KW ECO:0000256|PIRNR:PIRNR017127};
KW Mitosis {ECO:0000256|ARBA:ARBA00022776, ECO:0000256|PIRNR:PIRNR017127};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038}.
FT DOMAIN 85..249
FT /note="Condensin complex subunit 1 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF12922"
FT DOMAIN 972..1132
FT /note="Condensin complex subunit 1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF12717"
FT REGION 850..870
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1197..1216
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1226..1327
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1197..1212
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1260..1280
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1297..1327
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1327 AA; 146749 MW; 9AB4C0B3EEE85785 CRC64;
MAPPFVFPST LRDLERDDAD VGDGEPALRP QNPVAVGALR AADLEEFVKG TSFDLSDKEL
FCIEEQDVFD RVYSLVRDFT CLPPALKFNL VETLRSNLSV LLPNIDSLSR ASMSSPSDGV
PITDRIASHR NAFKIYSFFL LSVVVAEESA ADNCNGPKVA VHGRKKNPVY AWNWEAQRGR
IMNLIANSLE VDLSLLFGPG GADEQYLSFV SKCTFVLCEN QNVLKDEETR NSLCRIIGAI
ATKHQRISQT SASVSYLIHK FDFTVVLLVE AVVSAEKRFG DGSLAISLIR EIGRTDPKDY
VRDSGGADNV GRFLVELADR LPKLMSTNLG VLIPHFGGES YKIRNSLVGV LGKLAAKAFK
DVEGDSNSHS LRLRSKHAML EILIERCRDV SAYTRSRVLQ VWAELCEENA ISIGLWNEVA
SVASGRLEDK SAIVRKSALQ LLITMLQHNP FGPQLRTTTF EATLEKYKEK LQGMEPPSPD
KDELVNDSSL GEVIAGQDES VSDSCLPSSQ EQKDQDPTIV DITNLEQIRA LVASLEAGLR
FSTCITSLMP TLVQLLASPS ATDVENTILL LMRCRQFQIE GSEAALRKML PLVFSQDKSI
YEAVESAFIT IYARKSPTET AKSLLNLAID CSIGDLAALE SLVSSLVSKG EISSSTVSAL
WDYFCFHING VRPVQSRGAL SILCMAAKSS PSILGTHLQD IIDIGFGRWA KEEPLLARTA
CLALQRLSKE DKVKLTSTSS RVFAALQGLI TSLSLPEKIW YGAADKAISA IYALHPAPET
FAAEIAKKSL NSVFSVLGTD CMSNENETQN GSMLSSIPAT KLGRFLFIIS HIALNHLVYI
ETSVKTIQKQ KRKNDKSEPT TEDLQANASK NSEARDINAE LGLGATADIA IESLAEKAER
EIVSSSSQKN LIGYSGPFLA KLCRNLTLLQ KFPDLQASAM LALCRLMIID AEFCEANLQI
LFTVAESAPS EIVRSNCTIA LGDLAVRFPN LLEPWTEYIY ARLRDPSASV RKNAVLVISH
LILNDMMKVK GFINEMAVRI EDEDDRISSL AKLFFHELSK KGSNPIYNLL PDILGRLCNQ
HLKDETFCNI MQFLISSIKK DKQMEALVDK LCNRFAGVND VRQWEYISYC LSQLTFTEKG
LKKLVDNFKI FEHALSEDSV MNHFRSVIAK CKKFAKPDLK VCIEEFDEKL SKVHQEKKEQ
EATTRNAEAH KQRVGSLEGF MVTKETALDD GKSAEAETSE IIDPSLDNYS EDKENTPECS
DNICSENNHT SSTFTESEDD STEVQSARTS HRGASCSRVN KMREPEDSED SAPIRRVARR
RAAPAEM
//
