ID J3MQ13_ORYBR Unreviewed; 686 AA.
AC J3MQ13;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE RecName: Full=Bromo domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB08G11920.1};
RN [1] {ECO:0000313|EnsemblPlants:OB08G11920.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB08G11920.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB08G11920.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR AlphaFoldDB; J3MQ13; -.
DR STRING; 4533.J3MQ13; -.
DR EnsemblPlants; OB08G11920.1; OB08G11920.1; OB08G11920.
DR Gramene; OB08G11920.1; OB08G11920.1; OB08G11920.
DR eggNOG; KOG1474; Eukaryota.
DR HOGENOM; CLU_007920_1_0_1; -.
DR OMA; NENSRFM; -.
DR Proteomes; UP000006038; Chromosome 8.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR CDD; cd05506; Bromo_plant1; 1.
DR Gene3D; 1.20.1270.220; -; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR037377; GTE_bromo.
DR InterPro; IPR027353; NET_dom.
DR InterPro; IPR038336; NET_sf.
DR PANTHER; PTHR46136:SF1; TRANSCRIPTION FACTOR GTE11-RELATED; 1.
DR PANTHER; PTHR46136; TRANSCRIPTION FACTOR GTE8; 1.
DR Pfam; PF17035; BET; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR PRINTS; PR00503; BROMODOMAIN.
DR SMART; SM00297; BROMO; 1.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS51525; NET; 1.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|PROSITE-ProRule:PRU00035};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038}.
FT DOMAIN 100..172
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT DOMAIN 278..360
FT /note="NET"
FT /evidence="ECO:0000259|PROSITE:PS51525"
FT REGION 53..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 201..257
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 377..506
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 559..596
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 626..686
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 201..241
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 416..482
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 580..596
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 626..645
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 661..686
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 686 AA; 76263 MW; E83A5764D9BA6F4D CRC64;
MLPRMSSSDK RDLEMRFRKE LEQVKALQSR LFSRPTAVSM NGAASASRDV FAKKSNGKLK
RSNSVQSDRG VPPSAAPPVV RSANYAEAFR QCSNLLTNLF KHQWSTPFVV PVDPVKLNIP
DYFDIIKKPM DLGTIEKKLN AGMYSTPWDF AADMRLTFDN ATTYNPINND VHSMAKTLRK
IFETRWKFIE KKLPSLDDKL SVRREPSKKG AVKKDTIEQD YPSEKKHSTK GAHKKDIFTK
ENAATKPVSQ PKKRKASPLV QDALEIPVVE AEKVIEDAQV VQTSKEIMTD EQKYELSVRL
QSYGGLIPNH IVDFIRSRLP DDNEGEEDEL ELDMNALSDS TLFELQKLLD EYDSVNQSGN
PTKDEPCEVE FQSEYGVSNS SVHHEGNEVI EEDVDIDGND TYPPAVLESE APERSSKHST
SSSSSGGSES SSSDSDSSSS SGSDLDVSVP RPTSGVKDNT QSVMDQENDP LNTSNPPEQS
SDPVPISADD EGENVSEKQA PPAKNYRAAV LLNRFADTIF KAREKTLDQV AKKDPDKLQH
DMEELERLRR EERARLQAEA KAAEDARKRA QAAAAAEAAA EAKRQRERER EAARKALQQM
EKTVDINEGN LFLKDLEMLG TVTTGEQFPS SVGETSPSHT PEGLGFQLGS NPLEQLGLYM
KNDDEEDEEG ESADEPTVDV EEGEID
//
