ID J3MT04_ORYBR Unreviewed; 763 AA.
AC J3MT04;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 57.
DE RecName: Full=PWI domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB08G22340.1};
RN [1] {ECO:0000313|EnsemblPlants:OB08G22340.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB08G22340.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB08G22340.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR AlphaFoldDB; J3MT04; -.
DR STRING; 4533.J3MT04; -.
DR EnsemblPlants; OB08G22340.1; OB08G22340.1; OB08G22340.
DR Gramene; OB08G22340.1; OB08G22340.1; OB08G22340.
DR eggNOG; KOG2253; Eukaryota.
DR HOGENOM; CLU_007747_0_0_1; -.
DR OMA; DGCVNKK; -.
DR Proteomes; UP000006038; Chromosome 8.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR CDD; cd12446; RRM_RBM25; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.20.1390.10; PWI domain; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR002483; PWI_dom.
DR InterPro; IPR036483; PWI_dom_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR034268; RBM25_RRM.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR47334:SF2; RNA-BINDING MOTIF PROTEIN 25; 1.
DR PANTHER; PTHR47334; SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN; 1.
DR Pfam; PF01480; PWI; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00311; PWI; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF101233; PWI domain; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS51025; PWI; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 63..141
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 666..763
FT /note="PWI"
FT /evidence="ECO:0000259|PROSITE:PS51025"
FT REGION 152..334
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 350..421
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 447..576
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 595..648
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 173..188
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 190..229
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 254..334
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 456..482
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 562..576
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 763 AA; 86898 MW; 8F14B484D8F33FF8 CRC64;
MARYPGPYPM MRPGFPPRPM PPVGVMPLQR PPIIPGIRGA PPMVPPTARP PTPAAAPPGK
LPTAVYVGKI APTVDNEFLL SILRLCGPVK SWKRTQNPSS GKPVSFGFCE FESAEGILRA
TRLLNKLSID GQELVVNIND ATKEYLKKHV EEKKKAQENT KETEDGGGSV TAAVTGNELS
NTVSDETDTE AGDGGDKGNE ENPKKFGVVT EEDSESDKDV AEKISVMIEE WLKTRPPPPP
PPVEQSADIS SKQKNGESDV DMTKTDSEDK NDVGSDKRAV NETEKLETAS PDRRKDRDRD
KERRDREKEQ ERHERERERE RVRRDRDKDT RYKEVERLYK ERLKEWEYRE RDKELQRQHE
KEREKDRERE RKREIVKQED ESDEEDSRKR RRRSSGTLED RKRRRLREKE EDLADKLREE
EEIAEARRRA VELQQQADEA AAAAAAVAQS STVMEVDGDD GKERDAQDIP IVVDDGKESD
AFANGDDAGV NGKDNNGDEK NMIPGEILDT KHNSNAPAKK LGFGLIGSGK RTSVPSVFAE
EDDEDNDDKR ARPLVPIDYS TEELQAVQSN SSADQPNIVA AAEFAKRILV AKDEKPDVEK
DRGRRSSDRM SQRDRDRNDE DGGRIGDQRR EKTHDRERDK KDKSKSENKS ILDAKQLIDM
IPRTKEELFA YEINWAIYDK HELHERMRPW IAKKIIEFLG EEESTLVDYI VSCTKDHVQA
SKMLELLQSI LDVEAEMFVL KMWRMLIFEI KKVETGLSGR AKA
//
