ID   J3MU80_ORYBR            Unreviewed;       675 AA.
AC   J3MU80;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   24-JAN-2024, entry version 38.
DE   RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE            EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
OS   Oryza brachyantha (malo sina).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB08G26610.1};
RN   [1] {ECO:0000313|EnsemblPlants:OB08G26610.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB08G26610.1};
RX   PubMed=23481403;
RA   Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA   Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA   Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA   An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA   Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA   Chen M.;
RT   "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT   Oryza genome evolution.";
RL   Nat. Commun. 4:1595-1595(2013).
RN   [2] {ECO:0000313|EnsemblPlants:OB08G26610.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2013) to UniProtKB.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC         glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC         ChEBI:CHEBI:83408; EC=3.1.4.46;
CC         Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR   AlphaFoldDB; J3MU80; -.
DR   STRING; 4533.J3MU80; -.
DR   EnsemblPlants; OB08G26610.1; OB08G26610.1; OB08G26610.
DR   Gramene; OB08G26610.1; OB08G26610.1; OB08G26610.
DR   eggNOG; KOG2258; Eukaryota.
DR   HOGENOM; CLU_010414_0_1_1; -.
DR   OMA; LLMNNCT; -.
DR   Proteomes; UP000006038; Chromosome 8.
DR   GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR   GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR   CDD; cd08604; GDPD_SHV3_repeat_2; 1.
DR   Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 2.
DR   InterPro; IPR030395; GP_PDE_dom.
DR   InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR   PANTHER; PTHR43620:SF6; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE; 1.
DR   PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR   Pfam; PF03009; GDPD; 1.
DR   SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR   PROSITE; PS51704; GP_PDE; 2.
PE   4: Predicted;
KW   Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW   Signal {ECO:0000256|ARBA:ARBA00022729}.
FT   DOMAIN          1..248
FT                   /note="GP-PDE"
FT                   /evidence="ECO:0000259|PROSITE:PS51704"
FT   DOMAIN          265..570
FT                   /note="GP-PDE"
FT                   /evidence="ECO:0000259|PROSITE:PS51704"
FT   REGION          612..654
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   675 AA;  73670 MW;  E3FF6EF4B3491759 CRC64;
     MNNCTSIDQT YPQGKKTYIV NGKKQDGWFP IDYTMSSLQS VILTQAIWSR PDKFDFAYLP
     ILPVTNLTSL VKPSSLWLNI EHDIFYRQHG LNMTKYILSI SKNAAVKYIS SPELGFLRSI
     LGRVNRKTKL VFRFPDAASS DPSSNQTYGS LLSNLTFIKT VASGIIVPKE YIWPVAPNNN
     YIQPSKSIVG DAHNAGLEIY ASDFANDRII PYNYSYDPVE EYLHFVGNGN FSVDGVLTEH
     PVTAAMAIGC FTNLNVSSKT DHGNPLIISH NGASGDYPDC TDLAYQKAVD DGADVIDCTI
     QMTSDGVPIC MSSINLFDTT NVQRTIFSSR ASIIREIQTT PGIFTFNLTW AEISNSDLKP
     KISSPESLFY LVRNPLYQNA GKFFRLSDFL AFAKDKDLSG IMIIIENAAF MAESLGFDVV
     QSVANALSDA GYNNQTTEGK DVMIQSKDSA VLVKLKQQET KYKLVYTLPP KIGDASASSL
     VDVKKFADAV VVQRVSIFPT SQGFIMRETN LMKDLRSAGL AIYAQVFRNE FVSPPWDFFS
     DVTVEINTYV QSVKIDGFIT DFPKTVKRYK MNSCMGLGDN MPQYMLPVEI AGLAQLLNGS
     TVQPPALSPM PVLSSSNVTE PPLPAAVPKN ASGGGSGSGG TPAPGVPPSA AHPASATTRT
     GILLMVTVIC ASLHV
//