ID J3N373_ORYBR Unreviewed; 420 AA.
AC J3N373;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE RecName: Full=cysteine--tRNA ligase {ECO:0000256|ARBA:ARBA00012832};
DE EC=6.1.1.16 {ECO:0000256|ARBA:ARBA00012832};
DE AltName: Full=Cysteinyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00031499};
GN Name=102709403 {ECO:0000313|EnsemblPlants:OB10G19710.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB10G19710.1};
RN [1] {ECO:0000313|EnsemblPlants:OB10G19710.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB10G19710.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB10G19710.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC {ECO:0000256|ARBA:ARBA00005594}.
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DR RefSeq; XP_015697262.1; XM_015841776.1.
DR AlphaFoldDB; J3N373; -.
DR STRING; 4533.J3N373; -.
DR EnsemblPlants; OB10G19710.1; OB10G19710.1; OB10G19710.
DR Gramene; OB10G19710.1; OB10G19710.1; OB10G19710.
DR eggNOG; KOG2007; Eukaryota.
DR HOGENOM; CLU_013528_0_2_1; -.
DR OMA; HRDMYEL; -.
DR OrthoDB; 2140072at2759; -.
DR Proteomes; UP000006038; Chromosome 10.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004817; F:cysteine-tRNA ligase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006423; P:cysteinyl-tRNA aminoacylation; IEA:InterPro.
DR Gene3D; 1.20.120.1910; Cysteine-tRNA ligase, C-terminal anti-codon recognition domain; 1.
DR Gene3D; 3.40.50.620; HUPs; 1.
DR InterPro; IPR015803; Cys-tRNA-ligase.
DR InterPro; IPR024909; Cys-tRNA/MSH_ligase.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR032678; tRNA-synt_1_cat_dom.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR NCBIfam; TIGR00435; cysS; 1.
DR PANTHER; PTHR10890:SF24; CYSTEINE--TRNA LIGASE; 1.
DR PANTHER; PTHR10890; CYSTEINYL-TRNA SYNTHETASE; 1.
DR Pfam; PF01406; tRNA-synt_1e; 1.
DR PRINTS; PR00983; TRNASYNTHCYS.
DR SUPFAM; SSF47323; Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases; 1.
DR SUPFAM; SSF52374; Nucleotidylyl transferase; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase {ECO:0000256|ARBA:ARBA00023146};
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 1..215
FT /note="tRNA synthetases class I catalytic"
FT /evidence="ECO:0000259|Pfam:PF01406"
SQ SEQUENCE 420 AA; 48113 MW; 0C14CC6C40A1DEB1 CRC64;
MSELQCLPPT REPRVTEHIE QIIDLITKIM DNGKAYTIEG DVYFSVDNFP DYLSLSGRKV
DHNLPGKRVT VDTRKRNPAD FALWKSAKEG EPSWESPWGL GPLGRPGWHI ECSAMSAHYL
GKVFDIHGGG KDLIFPHHEN ELAQSQAAYP ESEVKCWMHN GFVNKDGQKM AKADKNFFTI
RDIISLYHPM ALRLFLMRTH YRSDVNHSDT ALQFASGRLY YIYQTQHEGE QSISLYRECK
LENYIPADDQ KLIDENHSKF LEKMSDDLHT TAVLDHLLVP LRAINNNLSD LKKLQQRLDH
QKKKQSLRQK QQQKKPEDYV QTLVALQNEV KEKLSILGLM PSSSLAEALR QLKEKALKRA
GMTAEQLHQL IEQRILARKN KDFAESDRIR TDLSALGIAL MDEPTGTLWK PSEPELTGES
//
