ID J4GT99_9APHY Unreviewed; 1463 AA.
AC J4GT99;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE RecName: Full=Dicer-like protein 1 {ECO:0008006|Google:ProtNLM};
GN ORFNames=FIBRA_06696 {ECO:0000313|EMBL:CCM04515.1};
OS Fibroporia radiculosa.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Polyporales; Fibroporiaceae; Fibroporia.
OX NCBI_TaxID=599839 {ECO:0000313|EMBL:CCM04515.1, ECO:0000313|Proteomes:UP000006352};
RN [1] {ECO:0000313|EMBL:CCM04515.1, ECO:0000313|Proteomes:UP000006352}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TFFH 294 {ECO:0000313|EMBL:CCM04515.1,
RC ECO:0000313|Proteomes:UP000006352};
RX PubMed=22247176; DOI=10.1128/AEM.06745-11;
RA Tang J.D., Perkins A.D., Sonstegard T.S., Schroeder S.G., Burgess S.C.,
RA Diehl S.V.;
RT "Short-read sequencing for genomic analysis of the brown rot fungus
RT Fibroporia radiculosa.";
RL Appl. Environ. Microbiol. 78:2272-2281(2012).
CC -!- SIMILARITY: Belongs to the helicase family. Dicer subfamily.
CC {ECO:0000256|PROSITE-ProRule:PRU00657}.
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DR EMBL; HE797160; CCM04515.1; -; Genomic_DNA.
DR RefSeq; XP_012183798.1; XM_012328408.1.
DR STRING; 599839.J4GT99; -.
DR GeneID; 24099426; -.
DR HOGENOM; CLU_000907_4_0_1; -.
DR InParanoid; J4GT99; -.
DR OrthoDB; 342391at2759; -.
DR Proteomes; UP000006352; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0004525; F:ribonuclease III activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd18034; DEXHc_dicer; 1.
DR CDD; cd00593; RIBOc; 2.
DR Gene3D; 3.30.160.380; Dicer dimerisation domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR Gene3D; 1.10.1520.10; Ribonuclease III domain; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR038248; Dicer_dimer_sf.
DR InterPro; IPR005034; Dicer_dimerisation_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000999; RNase_III_dom.
DR InterPro; IPR036389; RNase_III_sf.
DR PANTHER; PTHR14950; DICER-RELATED; 1.
DR PANTHER; PTHR14950:SF37; ENDORIBONUCLEASE DICER; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF03368; Dicer_dimer; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00636; Ribonuclease_3; 2.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SMART; SM00535; RIBOc; 2.
DR SUPFAM; SSF54768; dsRNA-binding domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF69065; RNase III domain-like; 2.
DR PROSITE; PS51327; DICER_DSRBF; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS00517; RNASE_3_1; 1.
DR PROSITE; PS50142; RNASE_3_2; 2.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000006352};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00657}.
FT DOMAIN 21..195
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 362..538
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 564..654
FT /note="Dicer dsRNA-binding fold"
FT /evidence="ECO:0000259|PROSITE:PS51327"
FT DOMAIN 950..1076
FT /note="RNase III"
FT /evidence="ECO:0000259|PROSITE:PS50142"
FT DOMAIN 1114..1261
FT /note="RNase III"
FT /evidence="ECO:0000259|PROSITE:PS50142"
SQ SEQUENCE 1463 AA; 164039 MW; 5B22AE7AEA721A0D CRC64;
MTIKLEDVSD ALLPRRYQEE IFARAQRGNV IAALDTGSGK TYISTLLIKW ISARHIGLRK
IIVFLVPKVA LVDQQGDFIA KQTPLRVIKC CGATAVDLSD RQGWKKELDR ADVLVMTAQI
FLNLLTHSHW SLDKVSLMVF DECHHTRKNH AYNGIMREYF QCPTQDRPKI FGMTASPIWN
PKDAVESLAT LERNLDAKVI AVRQHVGELM DHSPKPQELL HEYPPPLQSY PVYPTPTLWE
RMNLQQLPPN IGIPIDKIRT RYEVTYASLG PFGAELYLYN DIKQRITQIF QQISGVDIDY
LSVGYADTAG GDSVVPNLPD VELPAELEDL QDALVEYRSF FEDDSNSNSV PLTVHLKWCS
PKVRELIDIL FGHYTSTFQG IVFVEQRHVA ACLATMLSRV PQLSHLIKSE QLIGHGASTL
AKSQMKGMAL KTQQDIVKMF RERKINLLIA TSVAEEGLDF PACDLVIRFD PLQHMVGYLQ
SRGRARHRSS KFIIMVQQGH TVHTARYKSF SESEPQLRVV YQRRDIEAHF PDEEEEEQAH
PADLAERERY VVPSTGAILT YNSAIALLNH LCSLIPHDKF TPTHLPRYTG DFSSTLQLPM
SLPLPQEDLT YVGPNRRSKK EAKRAVAFVA VQRLHLLGVF DDYLLPAQSN GASGADADGR
AIQDVSKIPD MMKVDVRDPW TTGQTLWLDI VYLDGLPCAG LITGTLLPSV ELVCRGTYVS
TSERCKITFD EDDEWKQRRV LEDFMRMGIW WCITGRGITL PLTCYLVPIT HTLQINFDAL
ERAVQHPYGI PSWEGIGEDD YLQTLVMCSR EPGRPYLLRK IRTDISPLST PPPGSREAAF
STYKEYWQDK FSRKGTTFEV PETGPCVELQ PYLRHTSCVY SLDNGDGAQG APMTVPLVVL
FPLSLCRRAE ISEDVFRAFH VLPELCHRIT DVYRAHTARI ELGLPPIVDD LLVQALTLPS
ANAGFNNQRL ETLGDSVLKL ATVVYLFNKY PHRHEGQLDV LRRNSVSNRT LLARAKEVGL
EQYLSSEPQS VRLWRYTALP DRDLFEPYRY VPRVFPRRSL QDCMEALLGA AFVAGGIPMA
LRAGTALGLS FGGPLPWNAR YGGQIAESPV TVLFTDLQDT LGYRFRCGKL LLEAVTHPSF
GAAETSSYQR LEFLGDALID LTVMRYLYNK FPEATSGQLS WARSRAVCAP ALASVAVKRL
GLQKLLLVNN VELSIAMGKC IPILESLSEE EIILSGWKQD PPKAMSDVLE SVLGAVFVDL
DFNFEKASSI AEQVLNDLLE VLTPELPRDP VSNLMVWVAQ AGCRRVTYRK SSSRPDVKRN
DSISVVVHEH TLVGPLVAPN LSLAKGLASE RALAILSNPE SPQSIAHLCT CNIAVEKEIA
ADQVELADDE TEEGFAAIAR LMAEELEACG ETDPNVNNES PGCQDEYLLD SREEEEVEQM
MQIDDYDESL NSTPVQGERM DFC
//