ID J6EKK7_SACK1 Unreviewed; 929 AA.
AC J6EKK7;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE SubName: Full=CTF4-like protein {ECO:0000313|EMBL:EJT43722.1};
GN Name=YPR135W {ECO:0000313|EMBL:EJT43722.1};
GN Synonyms=SKDI16G3920 {ECO:0000313|EMBL:CAI4054062.1};
GN ORFNames=SKDI_16G3920 {ECO:0000313|EMBL:CAI4054062.1}, SKUD_205306
GN {ECO:0000313|EMBL:EJT43722.1};
OS Saccharomyces kudriavzevii (strain ATCC MYA-4449 / AS 2.2408 / CBS 8840 /
OS NBRC 1802 / NCYC 2889) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Saccharomycetaceae; Saccharomyces.
OX NCBI_TaxID=226230 {ECO:0000313|EMBL:EJT43722.1, ECO:0000313|Proteomes:UP000002753};
RN [1] {ECO:0000313|EMBL:EJT43722.1, ECO:0000313|Proteomes:UP000002753}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889
RC {ECO:0000313|Proteomes:UP000002753}, and IFO 1802
RC {ECO:0000313|EMBL:EJT43722.1};
RX PubMed=12775844; DOI=10.1126/science.1084337;
RA Cliften P.F., Sudarsanam P., Desikan A., Fulton L., Fulton B., Majors J.,
RA Waterston R., Cohen B.A., Johnston M.;
RT "Finding functional features in Saccharomyces genomes by phylogenetic
RT footprinting.";
RL Science 301:71-76(2003).
RN [2] {ECO:0000313|EMBL:EJT43722.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=IFO 1802 {ECO:0000313|EMBL:EJT43722.1};
RA Cliften P.F., Johnston M.;
RL Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000002753}
RP GENOME REANNOTATION.
RC STRAIN=ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889
RC {ECO:0000313|Proteomes:UP000002753};
RX PubMed=22384314; DOI=10.1534/g3.111.000273;
RA Scannell D.R., Zill O.A., Rokas A., Payen C., Dunham M.J., Eisen M.B.,
RA Rine J., Johnston M., Hittinger C.T.;
RT "The awesome power of yeast evolutionary genetics: New genome sequences and
RT strain resources for the Saccharomyces sensu stricto genus.";
RL G3 (Bethesda) 1:11-25(2011).
RN [4] {ECO:0000313|EMBL:EJT43722.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=IFO 1802 {ECO:0000313|EMBL:EJT43722.1};
RA Cliften P., Hittinger C.T., Wang B., Sudarsanam P., Desikan A., Fulton L.,
RA Fulton B., Majors J., Waterston R., Cohen B.A., Johnston M.;
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:CAI4054062.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=IFO1802 {ECO:0000313|EMBL:CAI4054062.1};
RA Byrne P K.;
RL Submitted (OCT-2022) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; OX365911; CAI4054062.1; -; Genomic_DNA.
DR EMBL; AACI03000512; EJT43722.1; -; Genomic_DNA.
DR AlphaFoldDB; J6EKK7; -.
DR STRING; 226230.J6EKK7; -.
DR HOGENOM; CLU_004219_2_0_1; -.
DR Proteomes; UP000002753; Unassembled WGS sequence.
DR Proteomes; UP001162087; Chromosome 16.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR048591; Ctf4-like_C.
DR InterPro; IPR022100; Mcl1_mid.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR19932; WD REPEAT AND HMG-BOX DNA BINDING PROTEIN; 1.
DR PANTHER; PTHR19932:SF10; WD REPEAT AND HMG-BOX DNA-BINDING PROTEIN 1; 1.
DR Pfam; PF20946; Ctf4_C; 1.
DR Pfam; PF12341; Mcl1_mid; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000002753};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574}.
FT DOMAIN 477..780
FT /note="Minichromosome loss protein Mcl1 middle region"
FT /evidence="ECO:0000259|Pfam:PF12341"
FT DOMAIN 821..923
FT /note="DNA polymerase alpha-binding protein Ctf4-like C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF20946"
FT REGION 404..425
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 437..457
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 783..810
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 408..425
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 929 AA; 105280 MW; 50C42267FAA3AA14 CRC64;
MVSIITKLVF DLGGKTLVSL APDNNTLCVA NKNGLTKILK TNNPEEEPET LDSSKSVSSI
RCYSNSFFLM TTMQGDALKY SIDSTQEELL ARFALPLRDC CVIHSGKMGV FGGDDLELIL
LELDDKSHKK HTIKIDEQIS QISYNSQMNI LAVSMINGRV QLFSLTSTIP NKVHELSDYI
VANSYDDTHR DKILSNMMDD IDKGSDDDLD EAIDSNENNI TDPEFCAFNR ICTRVAWHPK
GLHFALPCSD DTVKIFTIKG YSLQKTLTTN YSSAKAHFID LQFDPLRGTY IAAVDLNNKL
TVWNWETSEI HYTKEFKQKL TNFAWKIQPD SKTLDVVLGT WCGSIVTVQD LAESVMSNMP
DQSVTESSTK QGLFVNSDSD LENLEDDSTA EKSDKLFSDV AQEANSEDVF TQKHDDPSGL
NGKRKYNFED EEDFIDDDDG AGYTSGKNPH NDSSHLKTHK NYTLPISLAS TARFRYRPFS
PAGTPFGFTD RRYLTMNEVG YVSTVKNSEQ YSITVSFFDV GRFREYHFED LFGYDLCFLN
EKGTLFGQSK TGQIQYRPHD TIRSNWSKII PLQSGERITS VAATPVRVIV GTSLGYFRSF
NQFGVPFTIE KTSPIVALTA QDYRVFSVHY SQFHGLSYSL FELSTSTRKC YQRERPLPIS
LPNVNPDLKK ETNFDFYSFN PMGIKSLFFS SYGDPCIFGF DNTLLLLSKW RSFEESRWLP
VLDSSMEIWK MSGGKETRDI HVWPLSLTYD TLNCILVKGK HIWPEFPLPL PSEMEIRMPV
LVKSKLLEEK KAMLNKKNKL EVDAQENEEE DDKEIHIPIP MAAEEEYLRS KVLSELLTDT
LENDGEMYGN ENEVLAALNG AYDKALLRLF ASACSDQNVE KALSLAHELK QDRALNAAAK
ISERAALSSL VKRINDIREA RYEKNQNNM
//
