UniProt: J7H3W3

Database: UniProt
Entry: J7H3W3_CAPAN

LinkDB:  J7H3W3_CAPAN 
Original site:  J7H3W3_CAPAN

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Ontology (3)   
   GO (3)   
Gene (2)   
   KEGG GENES (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (8)   
   EMBL (8)   
Protein domain (3)   
   InterPro (2)   
   Pfam (1)   
Literature (4)   
   PubMed (4)   
All databases (21)   

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ID   J7H3W3_CAPAN            Unreviewed;        44 AA.
AC   J7H3W3;
DT   31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 52.
DE   RecName: Full=Photosystem I reaction center subunit IX {ECO:0000256|ARBA:ARBA00019868, ECO:0000256|HAMAP-Rule:MF_00522};
DE   AltName: Full=PSI-J {ECO:0000256|ARBA:ARBA00033429, ECO:0000256|HAMAP-Rule:MF_00522};
GN   Name=psaJ {ECO:0000256|HAMAP-Rule:MF_00522,
GN   ECO:0000313|EMBL:AFP90796.1};
GN   ORFNames=T459_24782 {ECO:0000313|EMBL:PHT69678.1}, T459_30449
GN   {ECO:0000313|EMBL:PHT66024.1}, T459_35393
GN   {ECO:0000313|EMBL:PHT57635.1}, T459_35840
GN   {ECO:0000313|EMBL:PHT24420.1};
OS   Capsicum annuum (Capsicum pepper).
OG   Plastid; Chloroplast {ECO:0000313|EMBL:AFP90796.1}.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX   NCBI_TaxID=4072 {ECO:0000313|EMBL:AFP90796.1};
RN   [1] {ECO:0000313|EMBL:AFP90796.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FS4401 {ECO:0000313|EMBL:AFP90796.1};
RX   PubMed=20978766; DOI=10.1007/s00299-010-0929-2;
RA   Jo Y.D., Park J., Kim J., Song W., Hur C.G., Lee Y.H., Kang B.C.;
RT   "Complete sequencing and comparative analyses of the pepper (Capsicum
RT   annuum L.) plastome revealed high frequency of tandem repeats and large
RT   insertion/deletions on pepper plastome.";
RL   Plant Cell Rep. 30:217-229(2011).
RN   [2] {ECO:0000313|EMBL:AFP90796.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=FS4401 {ECO:0000313|EMBL:AFP90796.1};
RA   Jo Y.D., Park J., Kim J., Song W., Hur C.-G., Lee Y.-H., Kang B.-C.;
RL   Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EMBL:PHT24420.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=24441736; DOI=10.1038/ng.2877;
RA   Kim S., Park M., Yeom S.I., Kim Y.M., Lee J.M., Lee H.A., Seo E., Choi J.,
RA   Cheong K., Kim K.T., Jung K., Lee G.W., Oh S.K., Bae C., Kim S.B.,
RA   Lee H.Y., Kim S.Y., Kim M.S., Kang B.C., Jo Y.D., Yang H.B., Jeong H.J.,
RA   Kang W.H., Kwon J.K., Shin C., Lim J.Y., Park J.H., Huh J.H., Kim J.S.,
RA   Kim B.D., Cohen O., Paran I., Suh M.C., Lee S.B., Kim Y.K., Shin Y.,
RA   Noh S.J., Park J., Seo Y.S., Kwon S.Y., Kim H.A., Park J.M., Kim H.J.,
RA   Choi S.B., Bosland P.W., Reeves G., Jo S.H., Lee B.W., Cho H.T., Choi H.S.,
RA   Lee M.S., Yu Y., Do Choi Y., Park B.S., van Deynze A., Ashrafi H., Hill T.,
RA   Kim W.T., Pai H.S., Ahn H.K., Yeam I., Giovannoni J.J., Rose J.K.,
RA   Sorensen I., Lee S.J., Kim R.W., Choi I.Y., Choi B.S., Lim J.S., Lee Y.H.,
RA   Choi D.;
RT   "Genome sequence of the hot pepper provides insights into the evolution of
RT   pungency in Capsicum species.";
RL   Nat. Genet. 46:270-278(2014).
RN   [4] {ECO:0000313|EMBL:PHT24420.1, ECO:0000313|Proteomes:UP000222542}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX   PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA   Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA   Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA   Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA   Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA   Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA   Bennetzen J.L., Choi D.;
RT   "New reference genome sequences of hot pepper reveal the massive evolution
RT   of plant disease-resistance genes by retroduplication.";
RL   Genome Biol. 18:R210.1-R210.11(2017).
RN   [5] {ECO:0000313|EMBL:AYN59822.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=Ann1 {ECO:0000313|EMBL:AYN60166.1}, Ann2
RC   {ECO:0000313|EMBL:AYN59822.1}, and Ann3 {ECO:0000313|EMBL:AYN60338.1};
RX   PubMed=30336638;
RA   D'Agostino N., Tamburino R., Cantarella C., De Carluccio V., Sannino L.,
RA   Cozzolino S., Cardi T., Scotti N.;
RT   "The Complete Plastome Sequences of Eleven Capsicum Genotypes: Insights
RT   into DNA Variation and Molecular Evolution.";
RL   Genes (Basel) 9:E503-E503(2018).
CC   -!- FUNCTION: May help in the organization of the PsaE and PsaF subunits.
CC       {ECO:0000256|ARBA:ARBA00002115, ECO:0000256|HAMAP-Rule:MF_00522}.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004167}. Plastid,
CC       chloroplast thylakoid membrane {ECO:0000256|HAMAP-Rule:MF_00522};
CC       Single-pass membrane protein {ECO:0000256|HAMAP-Rule:MF_00522}.
CC   -!- SIMILARITY: Belongs to the PsaJ family. {ECO:0000256|ARBA:ARBA00006318,
CC       ECO:0000256|HAMAP-Rule:MF_00522}.
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DR   EMBL; JX270811; AFP90796.1; -; Genomic_DNA.
DR   EMBL; MH559323; AYN59822.1; -; Genomic_DNA.
DR   EMBL; MH559327; AYN60166.1; -; Genomic_DNA.
DR   EMBL; MH559329; AYN60338.1; -; Genomic_DNA.
DR   EMBL; AYRZ02033807; PHT24420.1; -; Genomic_DNA.
DR   EMBL; AYRZ02001309; PHT57635.1; -; Genomic_DNA.
DR   EMBL; AYRZ02000012; PHT66024.1; -; Genomic_DNA.
DR   EMBL; AYRZ02000010; PHT69678.1; -; Genomic_DNA.
DR   RefSeq; YP_006666050.1; NC_018552.1.
DR   AlphaFoldDB; J7H3W3; -.
DR   SMR; J7H3W3; -.
DR   STRING; 4072.J7H3W3; -.
DR   EnsemblPlants; PHT24420; PHT24420; T459_35840.
DR   EnsemblPlants; PHT57635; PHT57635; T459_35393.
DR   EnsemblPlants; PHT66024; PHT66024; T459_30449.
DR   EnsemblPlants; PHT69678; PHT69678; T459_24782.
DR   GeneID; 13540240; -.
DR   Gramene; PHT24420; PHT24420; T459_35840.
DR   Gramene; PHT57635; PHT57635; T459_35393.
DR   Gramene; PHT66024; PHT66024; T459_30449.
DR   Gramene; PHT69678; PHT69678; T459_24782.
DR   KEGG; cann:13540240; -.
DR   OrthoDB; 1275733at2759; -.
DR   Proteomes; UP000222542; Chromosome 10.
DR   Proteomes; UP000222542; Chromosome 12.
DR   GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0009522; C:photosystem I; IEA:UniProtKB-KW.
DR   GO; GO:0015979; P:photosynthesis; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.20.5.510; Single helix bin; 1.
DR   HAMAP; MF_00522; PSI_PsaJ; 1.
DR   InterPro; IPR002615; PSI_PsaJ.
DR   InterPro; IPR036062; PSI_PsaJ_sf.
DR   PANTHER; PTHR36082; -; 1.
DR   PANTHER; PTHR36082:SF2; PHOTOSYSTEM I REACTION CENTER SUBUNIT IX; 1.
DR   Pfam; PF01701; PSI_PsaJ; 1.
DR   SUPFAM; SSF81544; Subunit IX of photosystem I reaction centre, PsaJ; 1.
PE   3: Inferred from homology;
KW   Chloroplast {ECO:0000313|EMBL:AFP90796.1};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_00522};
KW   Photosynthesis {ECO:0000256|ARBA:ARBA00022531, ECO:0000256|HAMAP-
KW   Rule:MF_00522};
KW   Photosystem I {ECO:0000256|ARBA:ARBA00022836, ECO:0000256|HAMAP-
KW   Rule:MF_00522}; Plastid {ECO:0000313|EMBL:AFP90796.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000222542};
KW   Thylakoid {ECO:0000256|HAMAP-Rule:MF_00522};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|HAMAP-
KW   Rule:MF_00522};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989, ECO:0000256|HAMAP-
KW   Rule:MF_00522}.
FT   TRANSMEM        6..27
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
SQ   SEQUENCE   44 AA;  5027 MW;  B22DFC68F244CEA4 CRC64;
     MRDLKTYLSV APVLSTLWFG ALAGLLIEIN RFFPDALTFP FFSF
//

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