ID   J9HJP8_9SPIT            Unreviewed;       877 AA.
AC   J9HJP8;
DT   31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 36.
DE   RecName: Full=HMG box domain-containing protein {ECO:0000259|PROSITE:PS50118};
GN   ORFNames=OXYTRI_14805 {ECO:0000313|EMBL:EJY65047.1};
OS   Oxytricha trifallax.
OC   Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC   Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX   NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY65047.1};
RN   [1] {ECO:0000313|EMBL:EJY65047.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JRB310 {ECO:0000313|EMBL:EJY65047.1};
RX   PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA   Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA   Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S., Fulton R.S.,
RA   Ly A., McGrath S., Haub K., Wiggins J.L., Storton D., Matese J.C.,
RA   Parsons L., Chang W.J., Bowen M.S., Stover N.A., Jones T.A., Eddy S.R.,
RA   Herrick G.A., Doak T.G., Wilson R.K., Mardis E.R., Landweber L.F.;
RT   "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome
RT   with 16,000 Tiny Chromosomes.";
RL   PLoS Biol. 11:E1001473-E1001473(2013).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJY65047.1}.
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DR   EMBL; AMCR01021723; EJY65047.1; -; Genomic_DNA.
DR   AlphaFoldDB; J9HJP8; -.
DR   EnsemblProtists; EJY65047; EJY65047; OXYTRI_14805.
DR   OrthoDB; 1222485at2759; -.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd00084; HMG-box_SF; 2.
DR   Gene3D; 1.10.30.10; High mobility group box domain; 3.
DR   InterPro; IPR009071; HMG_box_dom.
DR   InterPro; IPR036910; HMG_box_dom_sf.
DR   PANTHER; PTHR48112; HIGH MOBILITY GROUP PROTEIN DSP1; 1.
DR   PANTHER; PTHR48112:SF32; HIGH MOBILITY GROUP PROTEIN DSP1; 1.
DR   Pfam; PF00505; HMG_box; 3.
DR   SMART; SM00398; HMG; 3.
DR   SUPFAM; SSF47095; HMG-box; 3.
DR   PROSITE; PS50118; HMG_BOX_2; 3.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267}.
FT   DOMAIN          93..161
FT                   /note="HMG box"
FT                   /evidence="ECO:0000259|PROSITE:PS50118"
FT   DOMAIN          167..235
FT                   /note="HMG box"
FT                   /evidence="ECO:0000259|PROSITE:PS50118"
FT   DOMAIN          351..419
FT                   /note="HMG box"
FT                   /evidence="ECO:0000259|PROSITE:PS50118"
FT   DNA_BIND        93..161
FT                   /note="HMG box"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT   DNA_BIND        167..235
FT                   /note="HMG box"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT   DNA_BIND        351..419
FT                   /note="HMG box"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT   REGION          1..55
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..42
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   877 AA;  100993 MW;  7B53955B3DEE72F4 CRC64;
     MNQYKQQPQI SCSTSKAVIR ENSQKSSQNS EDALTQSIDK NAEHQLDPQD EEADSLIEEE
     LKNEFIEEET ITDKEFQRAM QKLKNRGLNA VPPKKSASAY IIFGKEKREE IIKKNPGLKV
     TEVVKQIAAT WQSLSKTDRL KYKEASKRDR DRYEKELKTL EDFSDNLKKP KKCLSAYMIF
     TRPKIVQKNP DMGALQVMQE VGKQWQAMTT DQKKYFKQKA DKDKVRYLNE QKAYYDEVEK
     VGLAVGTTTN KEGMIVVSSQ NKTYQPKSLF CQKNVLKACT NPNEEMQSLL QKRKLSINNQ
     QTNNQLLSAF KRIKTEEMNQ YSNLQPQQQI TNSRKGIICT ESYQQQFDGK PIKPQQSVGF
     FTQALRNALR QKYPFLNDAQ ICKAVSYRWN QLSDQQKSPF QSLADVDKIR YEKEVTDLKN
     GQFKGKSKQF EISIFQEQLE VKQALEINDD LLIFLQVKKA VKQSIENQNY SQDTQGQQES
     TSIHQDQMNQ GFSYQKGDLK NSQIFSENER NNENSQSQKD SHQIVSDSKL FENNKLNMSA
     DFDNDKSQLA KDILKMNTTS SNNEFSMQKN LFSSNQLLNR NLNIGSLSQT IKNLASNLAN
     NISQNPKANN LHSQNINNYS LEGFQVSHNN KDQQEQIALD GAQFATLQSQ NLIMADNQKS
     NIIQYAPRQA VGQQYQIVDE NGKSYLLQAQ PQQYSINPYG QIQFGLNPQN IQQTPQGLII
     SDNLLSQNIT TNPQSLYMNP MLNQGIQQNP FKQQIEIIDI NGVPTQVLTT GNQMQYIQQV
     PQGIQQSYMP QQNMIFQQQL PTQQLMQSSQ QQQPTQQQMN QIVNNQQQQQ IHQGLQQYNL
     AGQQQQPVQG LYYDNNQMQN HINLQNQLNA QGQQYMQ
//