ID J9HLF3_9SPIT Unreviewed; 1584 AA.
AC J9HLF3;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=PHD zinc finger-containing protein {ECO:0000313|EMBL:EJY65932.1};
GN ORFNames=OXYTRI_13909 {ECO:0000313|EMBL:EJY65932.1};
OS Oxytricha trifallax.
OC Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY65932.1};
RN [1] {ECO:0000313|EMBL:EJY65932.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JRB310 {ECO:0000313|EMBL:EJY65932.1};
RX PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S., Fulton R.S.,
RA Ly A., McGrath S., Haub K., Wiggins J.L., Storton D., Matese J.C.,
RA Parsons L., Chang W.J., Bowen M.S., Stover N.A., Jones T.A., Eddy S.R.,
RA Herrick G.A., Doak T.G., Wilson R.K., Mardis E.R., Landweber L.F.;
RT "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome
RT with 16,000 Tiny Chromosomes.";
RL PLoS Biol. 11:E1001473-E1001473(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJY65932.1}.
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DR EMBL; AMCR01021082; EJY65932.1; -; Genomic_DNA.
DR EnsemblProtists; EJY65932; EJY65932; OXYTRI_13909.
DR OrthoDB; 180929at2759; -.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15571; ePHD; 1.
DR CDD; cd15492; PHD_BRPF_JADE_like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 3.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR13793; PHD FINGER PROTEINS; 1.
DR Pfam; PF13831; PHD_2; 1.
DR Pfam; PF13832; zf-HC5HC2H_2; 1.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR PROSITE; PS51805; EPHD; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 715..765
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 898..1010
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT REGION 1..59
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 199..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 282..302
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1050..1081
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1138..1182
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1405..1458
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1515..1584
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 537..597
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 30..59
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 199..215
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 216..232
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 284..300
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1145..1163
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1410..1437
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1438..1452
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1515..1532
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1568..1584
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1584 AA; 185362 MW; 396892CD2583706C CRC64;
MNNQDCFSDL RHEESDDVNQ APPQKKLQGQ PHYVRDHSTH FDIENGSGSE MMKEDEKDVE
LHQRRVYGQN DHSTKPNALE RDRQNIVSDT AEHSKPSSTV SQGSLREVNG LKQAQKLYQT
PKVDKRYEAK LSTFENSELF SGARENQYAS NYSTIDKKAQ GNHSDENSQK SNDIYYNQPI
QDQNYEAYQQ NLDLSAQSCN QGDFHEDSNQ KAGSFSMIRE RERRSCRDKT SKYSLTHKGM
QSNIQAHEEQ ALNQNANQIR GLGPQGSDLN MNLGGPETIQ ESGLIKDGRP DGKAHKKSAP
RSTDQCLSTI ANMFAFDWSL KDIGNLRHSP QQELTSSIYW FYVNTQYFPF KALDLSQKPL
DDLIAPILQN LKPNNNYINK NIEELKQQEH NLIINDQQLQ QEILNSNNQQ NQDQNIFNAR
DFSQHDLNQQ LTVNNDTSPQ NLNLNGDQKP FQQYTPDYIM TLFREKRFRK FKKQFKELMQ
RLESEKKLDL VENLHTEIHD TLDINIEILP LGEKLQDSSD QQMVEEVIPK SEEQKLIEEK
LIERQKQDQT IQEANRNYDS MIDILQREIS NIEQSNRDQL KDQAQKLQKS YQIALDADPL
TSKDNFVYRQ DEMLSYDQEF VSKIDPMLIQ DFMINKEWYL ENFNEILLNV GHSSKLEKDF
LKHIEYVQQK KSDLKYKRIL KHIEQGKKGD QITMADLEQY QTLNSAKRNL VAQEDAQCAI
CNNGDYEEED MIVFCGNCNV PVHQSCYGIE QLPEGDWVCY NCDIFGMKRG LMLNCLLCPK
KGGCMKPTNI FSTVENYKMF NSGGNSSHAK KSSTKGKQTH HHYGQSVSEK ICLVDNLTPD
KRINIGENED KNLSLTVILN REFNFQSDLR QRYVLMESPL ETLDLIFDAN EKITQTPEDY
SFFLHKNESR LESHPKTESL YQWVHLSCAS WIPGPLVTPK TPVRLNKFDE KRFQLQCIIC
LKRDGACMQC QASRCTIAFH VECARRNNYC MEIERKDREK TYRMFCEKHR PLKIVKEMEE
KDKQTIEEIQ KFSKIIDKCM DIDFKHQLKP SKQHEKEKEL QKQQKYEREY QEHHQTSMKS
YKLPKPEKVR KEKILKEKKI KEVVKKWREK DKKMLFERIK EKYLMFRKMR INIVRVDPMK
KFKKSGKSQP ARKRSKKRVN KKQTAQSHIG GSRPGLRSKL PGNIEEDKQQ DLLQLQQEIM
MNDFEEEQKD QNYDNIEQTQ LDPTNEQNID QTDNIEEDQE IYYKLSIPTY PTDIDWTITL
SRNDFPWPEI KFNNFTAKDC YEKYVSIVKD AHAFLKKVLG LKEKYKKMMQ NQLALAQQIQ
MQQPVGQQNL AQGVVLTNAQ ESALYCKCKG AVISDLYVKC DGDDECVNGG WVHPQCTEEL
KNKSKEELDA IEEWYCEECQ ARIKKEDAEE DEEQKEEEDQ EEEEEEDDQD DDEEQNINQS
QQDNQMFIDN TGDNQEIPRE DYASHNQIIS YQDNKNIQQE NDEDHMMIDA EQIDEQELQE
AYLRENNNYS IRINASTQSA HLQQQQSKQL YKQLNEDEMD EDEENEGANV RVVAENNNDD
SNSRKDSSDS SHSQSSSSSS DHIF
//
