ID J9IGZ1_9SPIT Unreviewed; 1068 AA.
AC J9IGZ1;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=WD40 repeat-containing protein {ECO:0000313|EMBL:EJY80247.1};
GN ORFNames=OXYTRI_22363 {ECO:0000313|EMBL:EJY80247.1};
OS Oxytricha trifallax.
OC Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY80247.1};
RN [1] {ECO:0000313|EMBL:EJY80247.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JRB310 {ECO:0000313|EMBL:EJY80247.1};
RX PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S., Fulton R.S.,
RA Ly A., McGrath S., Haub K., Wiggins J.L., Storton D., Matese J.C.,
RA Parsons L., Chang W.J., Bowen M.S., Stover N.A., Jones T.A., Eddy S.R.,
RA Herrick G.A., Doak T.G., Wilson R.K., Mardis E.R., Landweber L.F.;
RT "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome
RT with 16,000 Tiny Chromosomes.";
RL PLoS Biol. 11:E1001473-E1001473(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJY80247.1}.
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DR EMBL; AMCR01007933; EJY80247.1; -; Genomic_DNA.
DR AlphaFoldDB; J9IGZ1; -.
DR EnsemblProtists; EJY80247; EJY80247; OXYTRI_22363.
DR OrthoDB; 3686044at2759; -.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR022100; Mcl1_mid.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19932; WD REPEAT AND HMG-BOX DNA BINDING PROTEIN; 1.
DR PANTHER; PTHR19932:SF10; WD REPEAT AND HMG-BOX DNA-BINDING PROTEIN 1; 1.
DR Pfam; PF12341; Mcl1_mid; 1.
DR Pfam; PF00400; WD40; 1.
DR SMART; SM00320; WD40; 4.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 245..285
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 460..759
FT /note="Minichromosome loss protein Mcl1 middle region"
FT /evidence="ECO:0000259|Pfam:PF12341"
FT REGION 408..428
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 761..788
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1068 AA; 121024 MW; FE4A63995F14DC70 CRC64;
MTEVKIQTVS NHLANKSSFT FFQDKILTIA EDSIMNIYQA NTSELVHKLD LDSEFYAIAS
NNVDKIAVGG ENQQVLIHTI VKSGQIEQDD VKQMFNESSL SEPHLALKFQ SAIQRIQWIG
KYIIGYSEDS EAQMYNTETE KVTYFKPGHE GSIKNGSLDP LCEFLATTGT DGFVNIYRIP
SEESSEVVEL VKKVKITKAK TQTFDQNPLE VAWTPDGSML LVTGESSLGM ISRNDWQLTY
SPELAHKMKS QISCITWIND SVLATSSIDK TIMFWNFTNK TLLNTSTSKN AVIQMAYCQK
NKSFGYLDFE SNLGVWNKEF PEFQIQQQIN ASQTSLKQDV QMEMINTEAE FESMNANEID
DDALIDGLNL SQDNQVPQVQ QPVVSNEQIK SQQSLAIQSQ QSSLKQVGNP RAGRSLLNNT
TNQDATNQQA KLVKSKADEI IDIYPQGILI PNCQFNFPVN KYRILAWNTV ATVALREEFQ
FTSVDVDFAN KQFHRNLVFN DDFGACMAQV GYSGLMLASK AEESNLDDYE EDEGVDDDDM
DIDVGQKEAK NRKKYSFVYF KPFSQYKTLK DWHYKLDLGE NTESLTVGSD WCAVYTDLNY
VRVFSLEGIQ KYVFCLGTPV VSIVGYENLL SVIYHAGPSV YGQQALKIKI VDMSSKSYQI
LADIECPISR YSNLCWVGYS EEGQLFTYDN EGILRCLNPS NNQWIPALDF RIRCPNNYAQ
LWIVGITEGE VLAIELPKGY LAPHLNQKSM IKRFKLKIPF LDQEKKDVDS KELTLPQLDE
EIQRLQQALD FETYRKDNWE QLKHFRSKYD SNYSMSESIL SAQEITNKKK EIDKLILNAI
RMCIVNSTTD GDHEKVFTYM EILNFTQSLN ICVTLCNQMN QDELAQKIRK FISEKEDKDI
IMETYKAKNK NTLASRMEGR KVFKSAHNTA GINEKPDISQ FAINTSSSSS QYVIQQQNQQ
VSEQINTSTS NNQDLSIKFN AGAINKDSTT QLQTQSVGDK VQQKTAPSVN PFQKKAGVDL
GKKQANSNGN SNDIFKDLSD AKQVAQQVGQ KRLVPFAQSN ASKQRKLK
//
